RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ZDHHC22Q8N966 263 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 OR1S1Q8NH92 325 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 SLC22A8Q8TCC7 542 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 SEC22AQ96IW7 307 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 SOX7Q9BT81 388 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 ASH2LQ9UBL3 628 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 GPN3Q9UHW5 284 aaPredicted RBP20.72■□□□□ 0.91
NDEL1-201ENST00000334527 TMEM14DPA8MWL7 114 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 SFTPDP35247 375 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 GABREP78334 506 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 SRSF4Q08170 494 aaKnown RBP20.72■□□□□ 0.91
NDEL1-201ENST00000334527 ZMYND11Q15326 602 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 ZNF385CQ66K41 422 aaPredicted RBP20.72■□□□□ 0.91
NDEL1-201ENST00000334527 SHDQ96IW2 340 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 NICN1Q9BSH3 213 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 COMMD9Q9P000 198 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 KCNK7Q9Y2U2 307 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 B3GALT1Q9Y5Z6 326 aa20.72■□□□□ 0.91
NDEL1-201ENST00000334527 IGHV5-10-1A0A0J9YXX1 117 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 MGMTP16455 207 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 ZNF121P58317 390 aaPredicted RBP20.71■□□□□ 0.91
NDEL1-201ENST00000334527 BAMBIQ13145 260 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 OR8B12Q8NGG6 310 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 FBLN5Q9UBX5 448 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 A0A0D9SG52 128 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 RAMP1O60894 148 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 TMEM81Q6P7N7 255 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 SLC25A47Q6Q0C1 308 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 DTWD2Q8NBA8 298 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 OR6X1Q8NH79 312 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 ST8SIA4Q92187 359 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 WDR87Q6ZQQ6 2873 aa20.71■□□□□ 0.91
NDEL1-201ENST00000334527 C9orf170A2RU37 121 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 A8MXK9 166 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 RER1O15258 196 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 SSX5O60225 188 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 PNLIPP16233 465 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 GSK3AP49840 483 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 TUSC1Q2TAM9 212 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 C11orf87Q6NUJ2 197 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 GLIPR1L1Q6UWM5 242 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 RASL10BQ96S79 203 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 PPA2Q9H2U2 334 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 GPR84Q9NQS5 396 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 MRPS28Q9Y2Q9 187 aaKnown RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 OR2AT4A6NND4 320 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 LGALS8O00214 317 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 IL2RAP01589 272 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 IFNA6P05013 189 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 DCNP07585 359 aaKnown RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 UBBP0CG47 229 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 ZNF43P17038 809 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 CASRP41180 1078 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 RPS27AP62979 156 aaKnown RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 UBA52P62987 128 aaKnown RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 IL13RA1P78552 427 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 SMUG1Q53HV7 270 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 PTCRAQ6ISU1 281 aaPredicted RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 OR5AS1Q8N127 324 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 RELL2Q8NC24 303 aaPredicted RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 ST8SIA2Q92186 375 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 SPACA9Q96E40 222 aaPredicted RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 FAM71F1Q96KD3 344 aaPredicted RBP20.7■□□□□ 0.9
NDEL1-201ENST00000334527 CCDC74BQ96LY2 380 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 OXGR1Q96P68 337 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 DEFB126Q9BYW3 111 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 ZNF319Q9P2F9 582 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 TNFSF18Q9UNG2 199 aa20.7■□□□□ 0.9
NDEL1-201ENST00000334527 PMP2P02689 132 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 QDPRP09417 244 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 KLK2P20151 261 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 ANOS1P23352 680 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
NDEL1-201ENST00000334527 TMEM176BQ3YBM2 270 aaPredicted RBP20.69■□□□□ 0.9
NDEL1-201ENST00000334527 OR4K17Q8NGC6 315 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 MITD1Q8WV92 249 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 PHB2Q99623 299 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 NUDT16L1Q9BRJ7 211 aaKnown RBP20.69■□□□□ 0.9
NDEL1-201ENST00000334527 LPAR5Q9H1C0 372 aa20.69■□□□□ 0.9
NDEL1-201ENST00000334527 C19orf25Q9UFG5 118 aaPredicted RBP20.69■□□□□ 0.9
NDEL1-201ENST00000334527 FAM25EA8MYX2 175 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 K7ESF4 209 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 FGF2P09038 288 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 EPHA8P29322 1005 aaPredicted RBP20.68■□□□□ 0.9
NDEL1-201ENST00000334527 CXCL12P48061 93 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 GFOD2Q3B7J2 385 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 RHOUQ7L0Q8 258 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 OVCH2Q7RTZ1 564 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 KCNRGQ8N5I3 272 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 ADAD2Q8NCV1 583 aaKnown RBP20.68■□□□□ 0.9
NDEL1-201ENST00000334527 TMEM104Q8NE00 496 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 OR2I1PQ8NGU4 316 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 PPP1R1CQ8WVI7 109 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 WNT16Q9UBV4 365 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 A0A0A6YYD4 124 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 LY6G6EA0A0G2JKS1 128 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 KRBOX1C9JBD0 128 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 MPIG6BO95866 241 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 HOXD4P09016 255 aaPredicted RBP20.68■□□□□ 0.9
NDEL1-201ENST00000334527 SLC25A4P12235 298 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms