RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 BLVRAP53004 296 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KRTAP10-6P60371 365 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RPL7AP62424 266 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 IL5RAQ01344 420 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CLCQ05315 142 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 EGR3Q06889 387 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 LSAMPQ13449 338 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KRT81Q14533 505 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PON3Q15166 354 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TPRXLQ17RH7 258 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 FAM153CQ494X1 144 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF585BQ52M93 769 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 UTF1Q5T230 341 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ELP2Q6IA86 826 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF66Q6ZN08 573 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 FP248Q71RG6 208 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 UTS2BQ765I0 119 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PEX26Q7Z412 305 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 WDR86Q86TI4 376 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MRPL52Q86TS9 123 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 SBSPONQ8IVN8 264 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CCDC103Q8IW40 242 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 UBE2J2Q8N2K1 259 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 C6orf223Q8N319 242 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PRELID2Q8N945 189 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 OR4K2Q8NGD2 314 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 FAM81AQ8TBF8 368 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 FBXO25Q8TCJ0 367 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 C11orf40Q8WZ69 217 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MYDGFQ969H8 173 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CLPTM1LQ96KA5 538 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 AMELYQ99218 206 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF251Q9BRH9 671 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 SIAEQ9HAT2 523 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 Q9N2K0 584 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 NT5MQ9NPB1 228 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ARMC1Q9NVT9 282 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 THAP1Q9NVV9 213 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ARGLU1Q9NWB6 273 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 BFARQ9NZS9 450 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 SLAMF8Q9P0V8 285 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 OSGIN1Q9UJX0 560 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RRP15Q9Y3B9 282 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ITPR2Q14571 2701 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TRBV6-6A0A0A6YYG2 114 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ARRDC5A6NEK1 342 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CFAP73A6NFT4 308 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ANKRD61A6NGH8 418 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 OOEPA6NGQ2 149 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 HMX3A6NHT5 357 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CEACAM18A8MTB9 384 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 IQCF5A8MTL0 148 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 NDUFAB1O14561 156 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 UTS2O95399 124 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 B3GALT4O96024 378 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 IFNA14P01570 189 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 HCKP08631 526 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CD37P11049 281 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CTRB1P17538 263 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TNFRSF1BP20333 461 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 BGNP21810 368 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CCL1P22362 96 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 EPHA2P29317 976 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PRKAR1BP31321 381 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 BRS3P32247 399 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PHBP35232 272 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ALDH3B1P43353 468 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 EIF3EP60228 445 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CTXN1P60606 82 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZP1P60852 638 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MAD2L1Q13257 205 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KRT33BQ14525 404 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MICAQ29983 383 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PLAC9Q5JTB6 97 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CFAP157Q5JU67 520 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KRBOX4Q5JUW0 171 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 LRIF1Q5T3J3 769 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TEDDM1Q5T9Z0 273 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM42Q69YG0 159 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CTRB2Q6GPI1 263 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 C8orf82Q6P1X6 216 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF529Q6P280 563 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF613Q6PF04 617 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 SLC16A13Q7RTY0 426 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 SLC51BQ86UW2 128 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MYPOPQ86VE0 399 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MYLK4Q86YV6 388 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 EIF4E3Q8N5X7 224 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CLDN22Q8N7P3 220 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CHST4Q8NCG5 386 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF680Q8NEM1 530 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 OR13G1Q8NGZ3 307 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 DNAJC9Q8WXX5 260 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TESCQ96BS2 214 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 APIPQ96GX9 242 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 C17orf77Q96MU5 243 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 NR1H4Q96RI1 486 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms