RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TNFSF10P50591 281 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 IDH3GP51553 393 aaPredicted RBP14.06□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF85Q03923 595 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 LY6DQ14210 128 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SLAMF6Q96DU3 332 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 CXorf58Q96LI9 332 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF426Q9BUY5 554 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 FASNP49327 2511 aaKnown RBP14.06□□□□□ -0.16
PDGFB-201ENST00000331163 L7N2F9 121 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 HPXP02790 462 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 POU3F4P49335 361 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SNTB2Q13425 540 aaKnown RBP14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SLC25A35Q3KQZ1 300 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SFRP5Q5T4F7 317 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 LINGO2Q7L985 606 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 OR6M1Q8NGM8 313 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 OR51E1Q8TCB6 317 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 GSX2Q9BZM3 304 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 CGGBP1Q9UFW8 167 aaPredicted RBP14.06□□□□□ -0.16
PDGFB-201ENST00000331163 LRRK2Q5S007 2527 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 DHHO43323 396 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 APEHP13798 732 aaKnown RBP14.06□□□□□ -0.16
PDGFB-201ENST00000331163 TPBGQ13641 420 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 TSPO2Q5TGU0 170 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SLC16A9Q7RTY1 509 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 NR2C2APQ86WQ0 139 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 GPR137Q96N19 417 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SEC22CQ9BRL7 303 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 KLHL9Q9P2J3 617 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF69Q9UC07 566 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SF3B6Q9Y3B4 125 aaKnown RBP14.06□□□□□ -0.16
PDGFB-201ENST00000331163 GPR171O14626 319 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 ZFPL1O95159 310 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 SIX6O95475 246 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 WNT11O96014 354 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 ITGA5P08648 1049 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FAM157BP0CG42 384 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 RAC3P60763 192 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 OR10K2Q6IF99 312 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 LIX1LQ8IVB5 337 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 POTEKPQ9BYX7 375 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 PROK2Q9HC23 129 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 GDF2Q9UK05 429 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FKBP7Q9Y680 259 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 PTHLHP12272 177 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 UBE2NP61088 152 aaKnown RBP14.05□□□□□ -0.16
PDGFB-201ENST00000331163 EXOSC6Q5RKV6 272 aaKnown RBP14.05□□□□□ -0.16
PDGFB-201ENST00000331163 SDHAF2Q9NX18 166 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 MGAT4CQ9UBM8 478 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 LOC100509620A0A075B734 347 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FXYD6-FXYD2A0A087WZ82 144 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 TRDV1A0A1B0GX56 115 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 RGS9O75916 674 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FOXG1P55316 489 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-201ENST00000331163 PLP2Q04941 152 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF627Q7L945 461 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 DTX1Q86Y01 620 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 WDFY1Q8IWB7 410 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 ASB10Q8WXI3 467 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 HOXB13Q92826 284 aaPredicted RBP14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FGGYQ96C11 551 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FXYD6Q9H0Q3 95 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 AUNIPQ9H7T9 357 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 FZR1Q9UM11 496 aa14.05□□□□□ -0.16
PDGFB-201ENST00000331163 ANKHD1Q8IWZ3 2542 aaKnown RBP14.04□□□□□ -0.16
PDGFB-201ENST00000331163 ARPC5O15511 151 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 SLC19A2O60779 497 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 FZD7O75084 574 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 VEGFCP49767 419 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF774Q6NX45 483 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 C5orf46Q6UWT4 87 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 LINC00114Q6XXX2 140 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 NOXO1Q8NFA2 376 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 DXOO77932 396 aaKnown RBP14.04□□□□□ -0.16
PDGFB-201ENST00000331163 TGM6O95932 706 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 ARF1P84077 181 aaKnown RBP14.04□□□□□ -0.16
PDGFB-201ENST00000331163 OPCMLQ14982 345 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 GFRALQ6UXV0 394 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 GINS4Q9BRT9 223 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF703Q9H7S9 590 aaPredicted RBP14.04□□□□□ -0.16
PDGFB-201ENST00000331163 LRP12Q9Y561 859 aa14.04□□□□□ -0.16
PDGFB-201ENST00000331163 A0A087WZY1 265 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 CDRT15L2A8MXV6 281 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 C1QTNF9BB2RNN3 333 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF208O43345 1280 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 C1QTNF9P0C862 333 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 GAS1P54826 345 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 UBE2MP61081 183 aaKnown RBP14.03□□□□□ -0.16
PDGFB-201ENST00000331163 PLA1AQ53H76 456 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 OR5AS1Q8N127 324 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 KCNK15Q9H427 330 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 FAM230AA0A1W2PPH8 454 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 TRIM77I1YAP6 450 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 UCHL1P09936 223 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 HIKESHIQ53FT3 197 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 ANKRD16Q6P6B7 361 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 CD163Q86VB7 1156 aa14.03□□□□□ -0.16
PDGFB-201ENST00000331163 CPNE4Q96A23 557 aaPredicted RBP14.03□□□□□ -0.16
PDGFB-201ENST00000331163 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
PDGFB-201ENST00000331163 HEXA-AS1Q9H8Q6 139 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms