RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ELOVL5Q9NYP7 299 aa14.34□□□□□ -0.11
PDLIM1-201ENST00000329399 CMAHPQ9Y471 501 aa14.34□□□□□ -0.11
PDLIM1-201ENST00000329399 ZNF469Q96JG9 3925 aaPredicted RBP14.33□□□□□ -0.11
PDLIM1-201ENST00000329399 TMEM269A0A1B0GVZ9 245 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 PSMD9O00233 223 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 FARS2O95363 451 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 OCM2P0CE71 109 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 PSKH1P11801 424 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF12P17014 697 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 SRMP19623 302 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 ACHEP22303 614 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 HSD11B1P28845 292 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 RPS27P42677 84 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 MXD1Q05195 221 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 WDR38Q5JTN6 314 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 OR7E24Q6IFN5 339 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 METAP1DQ6UB28 335 aaPredicted RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 DPPA2Q7Z7J5 298 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 CXorf67Q86X51 503 aaPredicted RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 NABP1Q96AH0 204 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 ZC3HAV1LQ96H79 300 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 CMTM3Q96MX0 182 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 DERL3Q96Q80 235 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 CENPMQ9NSP4 180 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 OR52A1Q9UKL2 312 aa14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 TEP1Q99973 2627 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-201ENST00000329399 NOTOA8MTQ0 251 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 KRT33AO76009 404 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 OR3A2P47893 321 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 SCRN3Q0VDG4 424 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF627Q7L945 461 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 CCDC190Q86UF4 302 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 TMEM200AQ86VY9 491 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 LINC00346Q8IVM7 164 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 PRSS35Q8N3Z0 413 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 IL17RDQ8NFM7 739 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 ITFG2Q969R8 447 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 DCLRE1CQ96SD1 692 aaKnown RBP14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF416Q9BWM5 594 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 CRLF2Q9HC73 371 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 GPR35Q9HC97 309 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 TCF7L1Q9HCS4 588 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 TMEM38BQ9NVV0 291 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 ABRACLQ9P1F3 81 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 RABL2AQ9UBK7 228 aaPredicted RBP14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 ASH2LQ9UBL3 628 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 ATPIF1Q9UII2 106 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 HHLA2Q9UM44 414 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 RABL2BQ9UNT1 228 aa14.32□□□□□ -0.12
PDLIM1-201ENST00000329399 TRBV5-7A0A0A0MS05 114 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 VGLL3A8MV65 326 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 DEFB108AA8MXU0 73 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 APEX1P27695 318 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 CDAP32320 146 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 SCAND1P57086 179 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 PSMA6P60900 246 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 PHYHD1Q5SRE7 291 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 BCL2L15Q5TBC7 163 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 C16orf87Q6PH81 154 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 BEND4Q6ZU67 534 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 MFSD4AQ8N468 514 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 APH1AQ96BI3 265 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 OR14A2Q96R54 314 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 KCNJ15Q99712 375 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 FOXB1Q99853 325 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 KCNS3Q9BQ31 491 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC30A2Q9BRI3 323 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 HDHD2Q9H0R4 259 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 EMC7Q9NPA0 242 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 G6PC2Q9NQR9 355 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 NUFIP1Q9UHK0 495 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 FOXJ3Q9UPW0 622 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 HIVEP1P15822 2718 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 MEGF11A6BM72 1044 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF587BE7ETH6 402 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 RGS5O15539 181 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 CNOT4O95628 575 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 BMP4P12644 408 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 LOXP28300 417 aaPredicted RBP14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 KIR3DL2P43630 455 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 ENDOGQ14249 297 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 ELFN2Q5R3F8 820 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 ELMOD2Q8IZ81 293 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 HSD17B8Q92506 261 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 SPTSSAQ969W0 71 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 ATF6BQ99941 703 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 NOX4Q9NPH5 578 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 FAM206AQ9NX38 181 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 CKLFQ9UBR5 152 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 TIMM10BQ9Y5J6 103 aa14.31□□□□□ -0.12
PDLIM1-201ENST00000329399 LYZL6O75951 148 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 PNPP00491 289 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 CLEC2LP0C7M8 214 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 IGHV1-2P23083 117 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 TNFSF8P32971 234 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 CAPZA1P52907 286 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 RAB35Q15286 201 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 SFXN4Q6P4A7 337 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 CORO6Q6QEF8 472 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms