RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 ZMAT1Q5H9K5 638 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 SPATA46Q5T0L3 261 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 LIPNQ5VXI9 398 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 LAIR2Q6ISS4 152 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 PAMR1Q6UXH9 720 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 FBXW12Q6X9E4 464 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 PGAP1Q75T13 922 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 DTX2Q86UW9 622 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 KLF14Q8TD94 323 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-201ENST00000328020 C4orf36Q96KX1 117 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 DYNLRB1Q9NP97 96 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 LAMP3Q9UQV4 416 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 LRRC42Q9Y546 428 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 PCDHGB5Q9Y5G0 923 aa12.11□□□□□ -0.47
CMTM1-201ENST00000328020 RGS10O43665 173 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 TIMM8AO60220 97 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-201ENST00000328020 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 CDK1P06493 297 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 HTR1AP08908 422 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 DANCRP0C864 163 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 CRHBPP24387 322 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 NKPD1Q17RQ9 610 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 ZNF684Q5T5D7 378 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 RNLSQ5VYX0 342 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 NAA40Q86UY6 237 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 COMMD2Q86X83 199 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 OR52N1Q8NH53 320 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 HAVCR1Q96D42 359 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 PBOV1Q9GZY1 135 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 MS4A5Q9H3V2 200 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 ACOXLQ9NUZ1 547 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 FKBP14Q9NWM8 211 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 NUFIP1Q9UHK0 495 aaKnown RBP12.1□□□□□ -0.47
CMTM1-201ENST00000328020 OR52A1Q9UKL2 312 aa12.1□□□□□ -0.47
CMTM1-201ENST00000328020 NOP16Q9Y3C1 178 aaKnown RBP12.1□□□□□ -0.47
CMTM1-201ENST00000328020 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
CMTM1-201ENST00000328020 IGLV3-9A0A075B6K5 115 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 A0A0U1RQV5 110 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 TMEM129A0AVI4 362 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 PRR32B1ATL7 298 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 M0R233 179 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 MAGEB4O15481 346 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 MRPS14O60783 128 aaKnown RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 MTRF1O75570 445 aaKnown RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 LIMS3P0CW19 117 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 LIMS4P0CW20 117 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 DDOSTP39656 456 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 ETV1P50549 477 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 OR12D2P58182 307 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 GABARAPL2P60520 117 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 SLC35A2P78381 396 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 GK2Q14410 553 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 SNAI3Q3KNW1 292 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 CCDC58Q4VC31 144 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 CCDC54Q8NEL0 328 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 SPRYD4Q8WW59 207 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 NINJ1Q92982 152 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 REEP6Q96HR9 211 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 LURAP1Q96LR2 239 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 SIGLEC11Q96RL6 698 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 SYT3Q9BQG1 590 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 TRAF4Q9BUZ4 470 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 MND1Q9BWT6 205 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 MRPL37Q9BZE1 423 aaKnown RBP12.09□□□□□ -0.47
CMTM1-201ENST00000328020 CCDC90BQ9GZT6 254 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 DUSP21Q9H596 190 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 TRIM36Q9NQ86 728 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 FZR1Q9UM11 496 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 LRCH1Q9Y2L9 728 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 ARID1AO14497 2285 aa12.09□□□□□ -0.47
CMTM1-201ENST00000328020 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
CMTM1-201ENST00000328020 UBCP0CG48 685 aaKnown RBP12.08□□□□□ -0.48
CMTM1-201ENST00000328020 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 ZNF12P17014 697 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 KITLGP21583 273 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 CCR9P51686 369 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 TAS2R43P59537 309 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 SWI5Q1ZZU3 235 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 GFOD2Q3B7J2 385 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 GLYATL3Q5SZD4 288 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 PRSS45Q7RTY3 260 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 PRSS48Q7RTY5 328 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 ELMOD2Q8IZ81 293 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 OR8B12Q8NGG6 310 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 RORBQ92753 470 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 SPSB4Q96A44 273 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 TRMT61AQ96FX7 289 aaKnown RBP12.08□□□□□ -0.48
CMTM1-201ENST00000328020 DIRC2Q96SL1 478 aa12.08□□□□□ -0.48
CMTM1-201ENST00000328020 RHNO1Q9BSD3 238 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms