RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 OR2AE1Q8NHA4 323 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 ITLN1Q8WWA0 313 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 AMELYQ99218 206 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 TEAD3Q99594 435 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 PKP2Q99959 881 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 SLC30A2Q9BRI3 323 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 SOX7Q9BT81 388 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 RIBC2Q9H4K1 309 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 OPA3Q9H6K4 179 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 DNAJC27Q9NZQ0 273 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 H2AFY2Q9P0M6 372 aaPredicted RBP12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 TMEFF2Q9UIK5 374 aaPredicted RBP12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 LAMP5Q9UJQ1 280 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 PPP1R3CQ9UQK1 317 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 WIPI2Q9Y4P8 454 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
TUBA3D-201ENST00000321253 ISPDA4D126 451 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 H3BNX3 289 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 M0R129 80 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 TBX1O43435 398 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 OPRL1P41146 370 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 RAD23AP54725 363 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 CDH15P55291 814 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 ZNF92Q03936 586 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 C12orf73Q69YU5 71 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 SLC16A9Q7RTY1 509 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 TMEM163Q8TC26 289 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 YIPF3Q9GZM5 350 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 TMEM106BQ9NUM4 274 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 TMEM160Q9NX00 188 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 CDC42EP3Q9UKI2 254 aa12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 NOP16Q9Y3C1 178 aaKnown RBP12.41□□□□□ -0.42
TUBA3D-201ENST00000321253 MALRD1Q5VYJ5 2156 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 JMJD1CQ15652 2540 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 CD300LBA8K4G0 201 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 B4DSR2 109 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 WNT9BO14905 357 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 MRPL3P09001 348 aaKnown RBP12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 ZNF121P58317 390 aaPredicted RBP12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 TIGD6Q17RP2 521 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 CHRFAM7AQ494W8 412 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 OR52H1Q8NGJ2 320 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 RAB39BQ96DA2 213 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 MEGF10Q96KG7 1140 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 IL4I1Q96RQ9 567 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 GAL3ST1Q99999 423 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 REPIN1Q9BWE0 567 aaKnown RBP12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 SLC22A4Q9H015 551 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 SHARPINQ9H0F6 387 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 BRD7Q9NPI1 651 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 TANC2Q9HCD6 1990 aa12.4□□□□□ -0.42
TUBA3D-201ENST00000321253 C5orf63A6NC05 138 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 CCDC182A6NF36 153 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 SLC22A31A6NKX4 558 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 F5H5P2 479 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 H0YL77 283 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 IFNL4K9M1U5 179 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 MLNRO43193 412 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 HLA-DPB1P04440 258 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 OR8G1Q15617 311 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 KCTD18Q6PI47 426 aaPredicted RBP12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 MEPCEQ7L2J0 689 aaKnown RBP12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 GID4Q8IVV7 300 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 C1orf159Q96HA4 380 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 CNN2Q99439 309 aaKnown RBP12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 BEX2Q9BXY8 128 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 OR10A2Q9H208 303 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 ZNF665Q9H7R5 613 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 NIPAL2Q9H841 368 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 LPAR3Q9UBY5 353 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 KLHDC2Q9Y2U9 406 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 NPTNQ9Y639 398 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 TMEM14AQ9Y6G1 99 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 ABCA2Q9BZC7 2435 aa12.39□□□□□ -0.43
TUBA3D-201ENST00000321253 ALOX5APP20292 161 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 HNF1AP20823 631 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 CA6P23280 308 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 ANOS1P23352 680 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 CFL1P23528 166 aaKnown RBP12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 POLR2IP36954 125 aaKnown RBP12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 LMO4P61968 165 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 GFOD2Q3B7J2 385 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 LRRN1Q6UXK5 716 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 BCDIN3DQ7Z5W3 292 aaKnown RBP12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 REEP6Q96HR9 211 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 ADAT1Q9BUB4 502 aaKnown RBP12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 S100A14Q9HCY8 104 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 GCM1Q9NP62 436 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 DYSFO75923 2080 aa12.38□□□□□ -0.43
TUBA3D-201ENST00000321253 IGHV3-64DA0A0J9YX35 117 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms