RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 TMEM35AQ53FP2 167 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 MESTQ5EB52 335 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 RNASE10Q5GAN6 216 aaKnown RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 MRM1Q6IN84 353 aaKnown RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 FIGLAQ6QHK4 219 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 SLC30A7Q8NEW0 376 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 XAGE5Q8WWM1 108 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 HIST1H2BHQ93079 126 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 SAMD8Q96LT4 415 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 PACRGQ96M98 296 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 HIST1H2BNQ99877 126 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 HIST1H2BMQ99879 126 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ZPBPQ9BS86 351 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 C19orf12Q9NSK7 152 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 OR5V1Q9UGF6 321 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 NTNG1Q9Y2I2 539 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 NUDT19A8MXV4 375 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 M0QYG6 137 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 FAM87AP0C7U9 286 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 SLC2A1P11166 492 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 SLC25A4P12235 298 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 LIFP15018 202 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 BMP7P18075 431 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 TLX1P31314 330 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 PTGER1P34995 402 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 TAS2R41P59536 307 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 TBPL1P62380 186 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 MRPS11P82912 194 aaKnown RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF763Q0D2J5 394 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 VWA2Q5GFL6 755 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF311Q5JNZ3 666 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 LPCAT3Q6P1A2 487 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF585AQ6P3V2 769 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 CLEC2AQ6UVW9 174 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 FRRS1Q6ZNA5 592 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 CAMKMTQ7Z624 323 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 MRGPREQ86SM8 312 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 OR4K17Q8NGC6 315 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 CCDC107Q8WV48 283 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ASB11Q8WXH4 323 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 MALSU1Q96EH3 234 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 RRNAD1Q96FB5 475 aaKnown RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 CCNL2Q96S94 520 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ACTRT3Q9BYD9 372 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 OR51B6Q9H340 312 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF71Q9NQZ8 489 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-201ENST00000318023 CSAG2Q9Y5P2 127 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 KPTNQ9Y664 436 aa8.4□□□□□ -1.06
CAPN3-201ENST00000318023 A0A087WV48 116 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 TRAV1-2A0A0B4J238 106 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 OR2C1O95371 312 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 FURINP09958 794 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 PAX1P15863 534 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 IMPA1P29218 277 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 TSFMP43897 325 aaKnown RBP8.4□□□□□ -1.07
CAPN3-201ENST00000318023 RAP1AP62834 184 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 RAC1P63000 192 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 GLO1Q04760 184 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 EIF3IQ13347 325 aaKnown RBP8.4□□□□□ -1.07
CAPN3-201ENST00000318023 C4orf17Q53FE4 359 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 SAPCD1Q5SSQ6 148 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 DMKNQ6E0U4 476 aaPredicted RBP8.4□□□□□ -1.07
CAPN3-201ENST00000318023 NIPAL3Q6P499 406 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 AGTRAPQ6RW13 159 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 LCTLQ6UWM7 567 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 HEPN1Q6WQI6 88 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 LRP11Q86VZ4 500 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 RAB42Q8N4Z0 105 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF610Q8N9Z0 462 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 NKD1Q969G9 470 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 NTNG2Q96CW9 530 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 PRODH2Q9UF12 536 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF223Q9UK11 482 aaPredicted RBP8.4□□□□□ -1.07
CAPN3-201ENST00000318023 PILRAQ9UKJ1 303 aa8.4□□□□□ -1.07
CAPN3-201ENST00000318023 KMT2BQ9UMN6 2715 aaPredicted RBP8.4□□□□□ -1.07
CAPN3-201ENST00000318023 C13orf42A0A1B0GVH6 325 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 GXYLT2A0PJZ3 443 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CDRT15L2A8MXV6 281 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 OR1F1O43749 312 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 FBXO24O75426 580 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 ARL6IP5O75915 188 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 EPPINO95925 133 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 PSMB10P40306 273 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 OMPP47874 163 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 SLC6A12P48065 614 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
CAPN3-201ENST00000318023 NKX6-1P78426 367 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-201ENST00000318023 DEFB109BQ30KR1 87 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 KCTD9Q7L273 389 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 COMMD6Q7Z4G1 85 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CYB561A3Q8NBI2 242 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 OR2L3Q8NG85 312 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 OR2A1Q8NGT9 310 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 SNIP1Q8TAD8 396 aaKnown RBP8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CASTOR1Q8WTX7 329 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms