RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TRIM77I1YAP6 450 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 BHLHE40O14503 412 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 EI24O14681 340 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 PEX2P28328 305 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 GATA4P43694 442 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 MMP16P51512 607 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 SEC61A1P61619 476 aaKnown RBP13.05□□□□□ -0.32
FOXR1-201ENST00000317011 CFAP77Q6ZQR2 320 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 JAZF1Q86VZ6 243 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 OR5AS1Q8N127 324 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 CBR4Q8N4T8 237 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 CELF2-AS1Q8N7Q2 184 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 DACT3Q96B18 629 aaPredicted RBP13.05□□□□□ -0.32
FOXR1-201ENST00000317011 NIPSNAP1Q9BPW8 284 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 C9orf16Q9BUW7 83 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 ESM1Q9NQ30 184 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 RPRD1BQ9NQG5 326 aaKnown RBP13.05□□□□□ -0.32
FOXR1-201ENST00000317011 KCNG2Q9UJ96 466 aa13.05□□□□□ -0.32
FOXR1-201ENST00000317011 ANXA8P13928 327 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 SELEP16581 610 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 OTX1P32242 354 aaPredicted RBP13.04□□□□□ -0.32
FOXR1-201ENST00000317011 CENPAP49450 140 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 SRP9P49458 86 aaKnown RBP13.04□□□□□ -0.32
FOXR1-201ENST00000317011 MAB21L1Q13394 359 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 GK2Q14410 553 aaPredicted RBP13.04□□□□□ -0.32
FOXR1-201ENST00000317011 PCK2Q16822 640 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
FOXR1-201ENST00000317011 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 C12orf54Q6X4T0 127 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 MUC20Q8N307 709 aaPredicted RBP13.04□□□□□ -0.32
FOXR1-201ENST00000317011 OR52E2Q8NGJ4 325 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 OR10S1Q8NGN2 331 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 ZNRF4Q8WWF5 429 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 MAP6Q96JE9 813 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 SLC6A7Q99884 636 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 RBM4Q9BWF3 364 aaKnown RBP13.04□□□□□ -0.32
FOXR1-201ENST00000317011 DGCR6LQ9BY27 220 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 ZNF556Q9HAH1 456 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 TMEM100Q9NV29 134 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 POLR1DQ9Y2S0 133 aa13.04□□□□□ -0.32
FOXR1-201ENST00000317011 CEACAM18A8MTB9 384 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 F5H5K5 113 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 MITFO75030 526 aaPredicted RBP13.03□□□□□ -0.32
FOXR1-201ENST00000317011 SOX14O95416 240 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 PTBP3O95758 552 aaKnown RBP13.03□□□□□ -0.32
FOXR1-201ENST00000317011 PPIAL4GP0DN37 164 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 FPR2P25090 351 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 DAPP51397 102 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
FOXR1-201ENST00000317011 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 ZBTB49Q6ZSB9 765 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 SDR9C7Q8NEX9 313 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 ZNF420Q8TAQ5 688 aaPredicted RBP13.03□□□□□ -0.32
FOXR1-201ENST00000317011 Q8TCH9 128 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 ERGIC1Q969X5 290 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 PITX2Q99697 317 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 ATF6BQ99941 703 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 RBM4BQ9BQ04 359 aaKnown RBP13.03□□□□□ -0.32
FOXR1-201ENST00000317011 CDADC1Q9BWV3 514 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
FOXR1-201ENST00000317011 AUP1Q9Y679 476 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
FOXR1-201ENST00000317011 F5H5P2 479 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 HAX1O00165 279 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 CASQ2O14958 399 aaPredicted RBP13.02□□□□□ -0.33
FOXR1-201ENST00000317011 RGS9O75916 674 aaPredicted RBP13.02□□□□□ -0.33
FOXR1-201ENST00000317011 NOS3P29474 1203 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 CD80P33681 288 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 CD200P41217 278 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 RAD23AP54725 363 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 OGFRL1Q5TC84 451 aaPredicted RBP13.02□□□□□ -0.33
FOXR1-201ENST00000317011 RPL13AP3Q6NVV1 102 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 RASSF6Q6ZTQ3 369 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 DOK3Q7L591 496 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.02□□□□□ -0.33
FOXR1-201ENST00000317011 LNX2Q8N448 690 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 OR10AD1Q8NGE0 317 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 NRG4Q8WWG1 115 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 SLC29A1Q99808 456 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 TMEM246Q9BRR3 403 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 OSBPL10Q9BXB5 764 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 HCAR1Q9BXC0 346 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 NMNAT2Q9BZQ4 307 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 WDR76Q9H967 626 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 PAPOLBQ9NRJ5 636 aaKnown RBP13.02□□□□□ -0.33
FOXR1-201ENST00000317011 MIOXQ9UGB7 285 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 NUP50Q9UKX7 468 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 LRCH1Q9Y2L9 728 aa13.02□□□□□ -0.33
FOXR1-201ENST00000317011 TNFRSF13BO14836 293 aaPredicted RBP13.01□□□□□ -0.33
FOXR1-201ENST00000317011 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
FOXR1-201ENST00000317011 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
FOXR1-201ENST00000317011 ALPLP05186 524 aa13.01□□□□□ -0.33
FOXR1-201ENST00000317011 ALDH3A2P51648 485 aa13.01□□□□□ -0.33
FOXR1-201ENST00000317011 TPTEP56180 551 aa13.01□□□□□ -0.33
FOXR1-201ENST00000317011 UBA52P62987 128 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms