RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 METTL21EPA6NDL7 271 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 CD3DP04234 171 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 ZNF24P17028 368 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 BDKRB2P30411 391 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 EIF1P41567 113 aaKnown RBP12.55□□□□□ -0.4
VRK3-201ENST00000316763 DHODHQ02127 395 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 IKZF1Q13422 519 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 RAB12Q6IQ22 244 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 WDFY1Q8IWB7 410 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 UXS1Q8NBZ7 420 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 CLEC1AQ8NC01 280 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 OR51A2Q8NGJ7 313 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 MRPL13Q9BYD1 178 aaKnown RBP12.55□□□□□ -0.4
VRK3-201ENST00000316763 EXO5Q9H790 373 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 FAM206AQ9NX38 181 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 CYB5R1Q9UHQ9 305 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 RAB22AQ9UL26 194 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 POLR1DQ9Y2S0 133 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 IGF2RP11717 2491 aa12.55□□□□□ -0.4
VRK3-201ENST00000316763 LINC00862A6NCI5 91 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 LDLRAD4O15165 306 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 DOK2O60496 412 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 RAB3DO95716 219 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ACSM4P0C7M7 580 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 HSD11B1P28845 292 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 SSTR2P30874 369 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 GNALP38405 381 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 EIF1AXP47813 144 aaKnown RBP12.54□□□□□ -0.4
VRK3-201ENST00000316763 CYB561P49447 251 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ELMOD2Q8IZ81 293 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 NOXO1Q8NFA2 376 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 OR4D10Q8NGI6 311 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 OR8S1Q8NH09 359 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 FGGYQ96C11 551 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 OR5B2Q96R09 309 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 MOB1AQ9H8S9 216 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 PIPOXQ9P0Z9 390 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 G3V3Q6 166 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 M0R233 179 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 SYT7O43581 403 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 CYB5AP00167 134 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 MELTFP08582 738 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ADH6P28332 368 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 RAB14P61106 215 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 PMPCAQ10713 525 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 TAF13Q15543 124 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 NHLRC1Q6VVB1 395 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ZCCHC14Q8WYQ9 949 aaKnown RBP12.54□□□□□ -0.4
VRK3-201ENST00000316763 TMEM41AQ96HV5 264 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 SLC25A21Q9BQT8 299 aaPredicted RBP12.54□□□□□ -0.4
VRK3-201ENST00000316763 PBOV1Q9GZY1 135 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
VRK3-201ENST00000316763 SEC61A2Q9H9S3 476 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 CA10Q9NS85 328 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 HDGFL3Q9Y3E1 203 aa12.54□□□□□ -0.4
VRK3-201ENST00000316763 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 L7N2F9 121 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 SCGNO76038 276 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 TTRP02766 147 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
VRK3-201ENST00000316763 PGA4P0DJD7 388 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 ITGA3P26006 1051 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 SOX8P57073 446 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 ABHD17BQ5VST6 288 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 RHOUQ7L0Q8 258 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 SLC22A24Q8N4F4 322 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 OR1M1Q8NGA1 313 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 OR6X1Q8NH79 312 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 ASB13Q8WXK3 278 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
VRK3-201ENST00000316763 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
VRK3-201ENST00000316763 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 TMEM138Q9NPI0 162 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
VRK3-201ENST00000316763 MAB21L2Q9Y586 359 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 CHD8Q9HCK8 2581 aa12.53□□□□□ -0.4
VRK3-201ENST00000316763 A0A087WZY1 265 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 ZNF726A6NNF4 738 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 LEUTXA8MZ59 168 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 CDK2AP1O14519 115 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 RGS11O94810 467 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 P04436 131 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 ZNF43P17038 809 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 NFYAP23511 347 aaPredicted RBP12.52□□□□□ -0.4
VRK3-201ENST00000316763 CD96P40200 585 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.4
VRK3-201ENST00000316763 OPCMLQ14982 345 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms