RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SLC25A42Q86VD7 318 aa15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 OR4K17Q8NGC6 315 aa15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 RHBDD1Q8TEB9 315 aa15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 DAZLQ92904 295 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 NKD1Q969G9 470 aa15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 FOXRED1Q96CU9 486 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 CPNE2Q96FN4 548 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 PHB2Q99623 299 aa15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 LPAR4Q99677 370 aa15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 MRPS18BQ9Y676 258 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-201ENST00000316097 A0A0B4J2A0 478 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 LNP1A1A4G5 178 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 YKT6O15498 198 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 OR2T1O43869 369 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 FARS2O95363 451 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 PNPP00491 289 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 HLA-DQA2P01906 255 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 IFNA4P05014 189 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 APEHP13798 732 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 CENPAP49450 140 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 RPL18Q07020 188 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 AIMP2Q13155 320 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 TOMM20Q15388 145 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 OR1N1Q8NGS0 311 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 NANPQ8TBE9 248 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 MITD1Q8WV92 249 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 DCUN1D4Q92564 292 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 SLCO5A1Q9H2Y9 848 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 MMP25Q9NPA2 562 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 SHPKQ9UHJ6 478 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 CSAG2Q9Y5P2 127 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 C13orf42A0A1B0GVH6 325 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 C5orf51A6NDU8 294 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 ZNF354AO60765 605 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 WISP1O95388 367 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 RENP00797 406 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 CD79AP11912 226 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 RNASE10Q5GAN6 216 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 NKAPLQ5M9Q1 402 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 HLA-DQA1Q5Y7H0 255 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 ACBD4Q8NC06 268 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 RNF141Q8WVD5 230 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 WWTR1Q9GZV5 400 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 UQCC1Q9NVA1 299 aa15.31■□□□□ 0.04
SCAMP4-201ENST00000316097 ZNF705EA8MWA4 302 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 LINC00587B1AMM8 73 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 IL33O95760 270 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ACAA1P09110 424 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 HLA-GP17693 338 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 BIKQ13323 160 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 MARCH3Q86UD3 253 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 BAP18Q8IXM2 172 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 OR10R2Q8NGX6 335 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 OTOSQ8NHW6 89 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 STOML3Q8TAV4 291 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ELP5Q8TE02 316 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 THRSPQ92748 146 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 PRRT1Q99946 306 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 CHMP1AQ9HD42 196 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 UBQLN4Q9NRR5 601 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 CKLFQ9UBR5 152 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 COPS7AQ9UBW8 275 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 FAM96BQ9Y3D0 163 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 PMS2P1A4D2B8 440 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 C2orf72A6NCS6 295 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ABOP16442 354 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 SLC17A1Q14916 467 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 KIF26BQ2KJY2 2108 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 EEF1A1P5Q5VTE0 462 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ZNF385CQ66K41 422 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ANKRD37Q7Z713 158 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ADGRE4PQ86SQ3 457 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 JAGN1Q8N5M9 183 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 DMBX1Q8NFW5 382 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 OR51A2Q8NGJ7 313 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 MRGPRFQ96AM1 343 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 OR8B4Q96RC9 309 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 SEC11CQ9BY50 192 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 TMEM100Q9NV29 134 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 FRG2CA6NGY1 282 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 NTN3O00634 580 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 DOK2O60496 412 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 AKR1C4P17516 323 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 PTGFRP43088 359 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 LURAP1LQ8IV03 231 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 ADAD2Q8NCV1 583 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 PLPP5Q8NEB5 264 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 MMP26Q9NRE1 261 aa15.3■□□□□ 0.04
SCAMP4-201ENST00000316097 F8VVB4 439 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 F8VWA3 439 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 TXNDC12O95881 172 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 IL2RAP01589 272 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 CRHP06850 196 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 ASAH2BP0C7U1 165 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 PSMB6P28072 239 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 TACR3P29371 465 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 MFGE8Q08431 387 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SPOCK1Q08629 439 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 MEF2DQ14814 521 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms