RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ETV7Q9Y603 341 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 CD160O95971 181 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 FAHP16930 419 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 RAC1P63000 192 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 OR2T2Q6IF00 324 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 OR8G2PQ6IF36 304 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 PRSS45Q7RTY3 260 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 PRSS42Q7Z5A4 293 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 VN1R4Q7Z5H5 301 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
RFFL-201ENST00000315249 RNF150Q9ULK6 438 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 INTS1Q8N201 2190 aaKnown RBP12.14□□□□□ -0.47
RFFL-201ENST00000315249 CEP250Q9BV73 2442 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 RAB6AP20340 208 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 GDNFP39905 211 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 SNRPGP62308 76 aaKnown RBP12.14□□□□□ -0.47
RFFL-201ENST00000315249 AQP6Q13520 282 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
RFFL-201ENST00000315249 BHLHA15Q7RTS1 189 aaPredicted RBP12.14□□□□□ -0.47
RFFL-201ENST00000315249 PHC2Q8IXK0 858 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 R4GMQ9 66 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 NKX2-8O15522 239 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 MICBQ29980 383 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 MRGPREQ86SM8 312 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 GPANK1O95872 356 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 MTNR1BP49286 362 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 FAM109AQ8N4B1 249 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 SLCO1C1Q9NYB5 712 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 B9D1Q9UPM9 204 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 KIR2DS1A0A191URI9 304 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 FBXO24O75426 580 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 KIR2DS4P43632 304 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 SUB1P53999 127 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFFL-201ENST00000315249 KIR2DS1Q14954 304 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 MFFQ9GZY8 342 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 CACNA1IQ9P0X4 2223 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ARHGEF17Q96PE2 2063 aaPredicted RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 TRGV10A0A0A0MS01 117 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 SPCS2Q15005 226 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 TGIF1Q15583 401 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ZNF74Q16587 644 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 PLK3Q9H4B4 646 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 A8MXE2 369 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 SPRY1O43609 319 aaPredicted RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 CA6P23280 308 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 TNFAIP6P98066 277 aaPredicted RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 ID4P47928 161 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 KLF3P57682 345 aaPredicted RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 ACSM1Q08AH1 577 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 AADACL4Q5VUY2 407 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 DESI1Q6ICB0 168 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ZNF816-ZNF321PA0A0X1KG74 233 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 K7EPK0 472 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ACOT8O14734 319 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 NKX2-2O95096 273 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 NKX2-5P52952 324 aaPredicted RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 FAM71E2Q8N5Q1 922 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 FRZBQ92765 325 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 DOCK6Q96HP0 2047 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 C3orf80F5H4A9 247 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 PRAF2O60831 178 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 HLA-HP01893 362 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 HBG1P69891 147 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 HBG2P69892 147 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ARL16Q0P5N6 197 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 ZNF626Q68DY1 528 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 WDR88Q6ZMY6 472 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 RHOXF1Q8NHV9 184 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
RFFL-201ENST00000315249 SIGLEC11Q96RL6 698 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 CHST2Q9Y4C5 530 aa12.13□□□□□ -0.47
RFFL-201ENST00000315249 NFYAP23511 347 aaPredicted RBP12.12□□□□□ -0.47
RFFL-201ENST00000315249 FMODQ06828 376 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 CATSPERDQ86XM0 798 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 CDC20BQ86Y33 519 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 UNKLQ9H9P5 680 aaKnown RBP12.12□□□□□ -0.47
RFFL-201ENST00000315249 GNB3P16520 340 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 GNG10P50151 68 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 MRPS34P82930 218 aaKnown RBP12.12□□□□□ -0.47
RFFL-201ENST00000315249 MC2RQ01718 297 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 ST3GAL6Q9Y274 331 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PATE4P0C8F1 98 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 COX6B1P14854 86 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 DOC2BQ14184 412 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PDZD9Q8IXQ8 264 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 SLC17A1Q14916 467 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 ZNF546Q86UE3 836 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 POC1BQ8TC44 478 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 FBXW5Q969U6 566 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PI4KAP42356 2102 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 AADACP22760 399 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 DUSP1P28562 367 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms