RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HEXBP07686 556 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 CASRP41180 1078 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 TSFMP43897 325 aaKnown RBP11.37□□□□□ -0.59
RETREG3-201ENST00000309428 ZNF117Q03924 483 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 CLEC12BQ2HXU8 276 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 CCDC74AQ96AQ1 378 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 ARL5BQ96KC2 179 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 AKIRIN1Q9H9L7 192 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-201ENST00000309428 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 MRPL22Q9NWU5 206 aaKnown RBP11.37□□□□□ -0.59
RETREG3-201ENST00000309428 hCG_1809904A0A1W2PP81 198 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 A0A1W2PR64 198 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 A0A1W2PRV1 198 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 ZNF705GA8MUZ8 300 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-201ENST00000309428 K7EPK0 472 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 XRCC2O43543 280 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 S100PP25815 95 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 GLO1Q04760 184 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 FAM71E2Q8N5Q1 922 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 OR1L3Q8NH93 324 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 LILRB1Q8NHL6 650 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-201ENST00000309428 TM4SF19Q96DZ7 209 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 JAM3Q9BX67 310 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 MIOXQ9UGB7 285 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 SUSD2Q9UGT4 822 aa11.37□□□□□ -0.59
RETREG3-201ENST00000309428 ZNF407Q9C0G0 2248 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 OR6C76A6NM76 312 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 SEC14L5O43304 696 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 ID4P47928 161 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 HNRNPKP61978 463 aaKnown RBP eCLIP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 WBP2NLQ6ICG8 309 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 RBMS3Q6XE24 437 aaKnown RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 MAMDC2Q7Z304 686 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 DCXRQ7Z4W1 244 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 OR4D6Q8NGJ1 314 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 OR6N1Q8NGY5 312 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 STACQ99469 402 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 CDCA3Q99618 268 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 TAF9BQ9HBM6 251 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 KLHL13Q9P2N7 655 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 IGHV3-15A0A0B4J1V0 119 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 A6NCN8 305 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 TNFRSF10CO14798 259 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 DIRAS3O95661 229 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 CDAP32320 146 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 PPIAP62937 165 aaKnown RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 RXFP4Q8TDU9 374 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 TCTN2Q96GX1 697 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 PIGQQ9BRB3 760 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 ZMAT5Q9UDW3 170 aaKnown RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 ZFHX2Q9C0A1 2572 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-201ENST00000309428 LOC107986453A0A1B0GWG9 222 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 SNAPC5O75971 98 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 ETV3LQ6ZN32 361 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 EID2Q8N6I1 236 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 NPEPL1Q8NDH3 523 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 SECTM1Q8WVN6 248 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 DCBLD2Q96PD2 775 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 MRI1Q9BV20 369 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 SLC2A4RGQ9NR83 387 aa11.36□□□□□ -0.59
RETREG3-201ENST00000309428 FAM221AA4D161 298 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 SFTA3P0C7M3 94 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 CD53P19397 219 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 DPP4P27487 766 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 CD96P40200 585 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 PTGFRP43088 359 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 VAMP2P63027 116 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 CYCSP99999 105 aaKnown RBP11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TLE3Q04726 772 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 PRTGQ2VWP7 1150 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 ATPAF1Q5TC12 328 aaPredicted RBP11.35□□□□□ -0.59
RETREG3-201ENST00000309428 STPG1Q5TH74 334 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TMEM225Q6GV28 225 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 ZNF595Q8IYB9 648 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TMEM104Q8NE00 496 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 FNDC9Q8TBE3 224 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 LCORQ96JN0 433 aaPredicted RBP11.35□□□□□ -0.59
RETREG3-201ENST00000309428 OR5B2Q96R09 309 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 A0A087WUJ7 227 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TRBV11-1A0A0K0K1C0 115 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TUBAL3A6NHL2 446 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 A6NLC8 198 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 LMX1BO60663 402 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 RBMXL2O75526 392 aaKnown RBP11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TMEM225BP0DP42 221 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 ADRA2CP18825 462 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 MEF2DQ14814 521 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 TSC22D1Q15714 1073 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 FHL5Q5TD97 284 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 PRAMEF8Q5VWM4 474 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 PRAMEF7Q5VXH5 474 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 NAXDQ8IW45 347 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
RETREG3-201ENST00000309428 AMDHD2Q9Y303 409 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 BORCS7-ASMTA0A0B4J1R7 106 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 PET100P0DJ07 73 aa11.35□□□□□ -0.59
RETREG3-201ENST00000309428 NR0B2Q15466 257 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms