RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ALG8Q9BVK2 526 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 DYNLRB1Q9NP97 96 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 ERVK13-1Q9NX77 482 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 ITPR2Q14571 2701 aa15.36■□□□□ 0.05
SSSCA1-201ENST00000309328 LOC110117498-PIK3R3F6TDL0 507 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 SLC1A7O00341 560 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 CD8AP01732 235 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 ATP6V1B1P15313 513 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 ERVS71-1P61550 626 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 ST3GAL4Q11206 333 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 PCGF3Q3KNV8 242 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 RBM48Q5RL73 367 aaKnown RBP15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 SPATA46Q5T0L3 261 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 LIPNQ5VXI9 398 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 FAM57BQ71RH2 274 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 CCDC54Q8NEL0 328 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 GGHQ92820 318 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 CNBD2Q96M20 576 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 DIRC2Q96SL1 478 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 REPIN1Q9BWE0 567 aaKnown RBP15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 SLC22A4Q9H015 551 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 RAB1BQ9H0U4 201 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 BARX1Q9HBU1 254 aaPredicted RBP15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 ZNF701Q9NV72 531 aaPredicted RBP15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 FAM206AQ9NX38 181 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 GNG8Q9UK08 70 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 MYRFQ9Y2G1 1151 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 PLEKHA6Q9Y2H5 1048 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 CAB39Q9Y376 341 aaPredicted RBP15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 SPG11Q96JI7 2443 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 NOTCH2Q04721 2471 aa15.35■□□□□ 0.05
SSSCA1-201ENST00000309328 TMEM129A0AVI4 362 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 TBX1O43435 398 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 TIMM8AO60220 97 aaPredicted RBP15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 PSG7Q13046 419 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 GK2Q14410 553 aaPredicted RBP15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 MST1LQ2TV78 715 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 SNAI3Q3KNW1 292 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 BCL2L15Q5TBC7 163 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 RNLSQ5VYX0 342 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 SSX6Q7RTT6 188 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 RFLNBQ8N5W9 214 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 CMBLQ96DG6 245 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 SYT3Q9BQG1 590 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 CACNG6Q9BXT2 260 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 YTHDF1Q9BYJ9 559 aaKnown RBP15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 GSX2Q9BZM3 304 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 FKBP14Q9NWM8 211 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 PTTG3PQ9NZH4 202 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 TAAR3PQ9P1P4 343 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 PURGQ9UJV8 347 aaKnown RBP15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 ZDHHC8Q9ULC8 765 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 LRBAP50851 2863 aa15.34■□□□□ 0.05
SSSCA1-201ENST00000309328 IQCF6A8MYZ5 107 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 PSMD9O00233 223 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 XPNPEP2O43895 674 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 MTRF1O75570 445 aaKnown RBP15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 SLC2A1P11166 492 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 DEFB113Q30KQ7 82 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 LAIR2Q6ISS4 152 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 FDX2Q6P4F2 183 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 AHSA2Q719I0 299 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 LHFPL3Q86UP9 236 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 NAA40Q86UY6 237 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 KLHL36Q8N4N3 616 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 OR52N1Q8NH53 320 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 REEP6Q96HR9 211 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 TTTY10Q9BZA0 68 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 PBOV1Q9GZY1 135 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 LIME1Q9H400 295 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 NKIRAS2Q9NYR9 191 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 OR52A1Q9UKL2 312 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 FZR1Q9UM11 496 aa15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 RAI1Q7Z5J4 1906 aaPredicted RBP15.33■□□□□ 0.04
SSSCA1-201ENST00000309328 PRR32B1ATL7 298 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 MRPS14O60783 128 aaKnown RBP15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 SRSF10O75494 262 aaKnown RBP15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 ADH4P08319 380 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 LIMS3P0CW19 117 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 LIMS4P0CW20 117 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 MPV17P39210 176 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 CCR9P51686 369 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 GBX2P52951 348 aaPredicted RBP15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 MSMPQ1L6U9 139 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 CCDC58Q4VC31 144 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 GLYATL3Q5SZD4 288 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 LRP11Q86VZ4 500 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 KLBQ86Z14 1044 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 ELMOD2Q8IZ81 293 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 CSNK2A3Q8NEV1 391 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 OR8B12Q8NGG6 310 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 SPRYD4Q8WW59 207 aaPredicted RBP15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 NEU4Q8WWR8 484 aaPredicted RBP15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 NRGNQ92686 78 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 C4orf36Q96KX1 117 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 SIGLEC11Q96RL6 698 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 BRD7Q9NPI1 651 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 ACOXLQ9NUZ1 547 aa15.32■□□□□ 0.04
SSSCA1-201ENST00000309328 MRPL15Q9P015 296 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms