RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TIGD4Q8IY51 512 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 DEFB108BQ8NET1 73 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 OR4M2Q8NGB6 313 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 TEX47Q8TBZ9 253 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 SPTSSAQ969W0 71 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 DACT3Q96B18 629 aaPredicted RBP16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 KCNJ15Q99712 375 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 METRNQ9UJH8 293 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 RIIAD1A6NNX1 92 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 CD300LBA8K4G0 201 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 CEACAM18A8MTB9 384 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 J3QLI3 93 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 GSC2O15499 205 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 VENTXO95231 258 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 FSTL3O95633 263 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 CYB5R3P00387 301 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 IFNGP01579 166 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 SLC2A1P11166 492 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF3P17036 446 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 ADRA2CP18825 462 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 PRKACGP22612 351 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 MDH2P40926 338 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 CD200P41217 278 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 PRKXP51817 358 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 HOXA4Q00056 320 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 CDK5Q00535 292 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 PAX2Q02962 417 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 BNIP1Q12981 228 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 FAM201AQ5SY85 155 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 PGAP1Q75T13 922 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 DPY19L4Q7Z388 723 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 MOGAT3Q86VF5 341 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 SPICQ8N5J4 248 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 OR6K6Q8NGW6 343 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 Q8TCH9 128 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 SPSB4Q96A44 273 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 TMEM100Q9NV29 134 aa16.62■□□□□ 0.25
PDZRN3-202ENST00000308537 TCF21O43680 179 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 DNAJC8O75937 253 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 GLCEO94923 617 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF205O95201 554 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 WNT2P09544 360 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 SRP9P49458 86 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 CBX1P83916 185 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 GINS1Q14691 196 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 DCAF12L2Q5VW00 463 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 SPATA24Q86W54 205 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 CELF2-AS1Q8N7Q2 184 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 RNF133Q8WVZ7 376 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 UTP4Q969X6 686 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 COPS4Q9BT78 406 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 ABHD6Q9BV23 337 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF319Q9P2F9 582 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 DNAJB9Q9UBS3 223 aa16.61■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF878C9JN71 531 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 H3BN98 237 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 IFNL4K9M1U5 179 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 FOXH1O75593 365 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 OSMP13725 252 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 SLC2A5P22732 501 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 GATA3P23771 443 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 BLVRAP53004 296 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 MALLQ13021 153 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 MPPED2Q15777 294 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 KLHL12Q53G59 568 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 KLHL36Q8N4N3 616 aa16.6■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF12P17014 697 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 EPHA1P21709 976 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 CA6P23280 308 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 GSTT1P30711 240 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 OPRL1P41146 370 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF404Q494X3 552 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 PRAMEF6Q5VXH4 476 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 FAHD1Q6P587 224 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 SPATC1Q76KD6 591 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 MRPL21Q7Z2W9 205 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 DVL3Q92997 716 aaPredicted RBP16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 INTS14Q96SY0 518 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 TMEM246Q9BRR3 403 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 C7orf69Q9H7B7 122 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 YY1AP1Q9H869 796 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 SLC25A19Q9HC21 320 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 CENPMQ9NSP4 180 aa16.59■□□□□ 0.25
PDZRN3-202ENST00000308537 EIF2B1Q14232 305 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 LIPNQ5VXI9 398 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 TMEM236Q5W0B7 351 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 PLBD1Q6P4A8 553 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 SHQ1Q6PI26 577 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 RHOUQ7L0Q8 258 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 ERI1Q8IV48 349 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 MUC20Q8N307 709 aaPredicted RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 BBS1Q8NFJ9 593 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 OR56B2PQ8NGI1 322 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 OR6N2Q8NGY6 317 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 SGK3Q96BR1 496 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 ZMYND19Q96E35 227 aaPredicted RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 MMADHCQ9H3L0 296 aaPredicted RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 MRPL15Q9P015 296 aaKnown RBP16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 KLHDC2Q9Y2U9 406 aa16.58■□□□□ 0.24
PDZRN3-202ENST00000308537 INSIG2Q9Y5U4 225 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms