RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZDHHC11Q9H8X9 412 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 HSF4Q9ULV5 492 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 CCR9P51686 369 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 SNTB1Q13884 538 aaKnown RBP11.47□□□□□ -0.57
USP38-201ENST00000307017 MIDNQ504T8 468 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 LAIR1Q6GTX8 287 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 UCK1Q9HA47 277 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 GHRLQ9UBU3 117 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 NKX6-3A6NJ46 265 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 ALX3O95076 343 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 C17orf67Q0P5P2 114 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 HMGN3Q15651 99 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 CYHR1Q6ZMK1 362 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 CYS1Q717R9 158 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 GALNT16Q8N428 558 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 OR13C8Q8NGS7 320 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 C4orf47A7E2U8 309 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 AQP6Q13520 282 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 OR2M7Q8NG81 312 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 PGAP3Q96FM1 320 aaPredicted RBP11.47□□□□□ -0.57
USP38-201ENST00000307017 MED18Q9BUE0 208 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 C6orf106Q9H6K1 298 aaPredicted RBP11.47□□□□□ -0.57
USP38-201ENST00000307017 B3GALT5Q9Y2C3 310 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 ZBTB42B2RXF5 422 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
USP38-201ENST00000307017 TCTN1Q2MV58 587 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 LINC00303Q3SY05 128 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 FAM24BQ8N5W8 94 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 SETD1AO15047 1707 aaKnown RBP11.47□□□□□ -0.57
USP38-201ENST00000307017 SDHAP31040 664 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 B2MP61769 119 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 REEP5Q00765 189 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 SEZ6L2Q6UXD5 910 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.47□□□□□ -0.57
USP38-201ENST00000307017 LPAR5Q9H1C0 372 aa11.47□□□□□ -0.57
USP38-201ENST00000307017 FBLL1A6NHQ2 334 aaKnown RBP11.46□□□□□ -0.57
USP38-201ENST00000307017 SPI1P17947 270 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 CHRNA7P36544 502 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 NCR3LG1Q68D85 454 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 SLC48A1Q6P1K1 146 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.57
USP38-201ENST00000307017 ADPRHL1Q8NDY3 354 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 NEURL3Q96EH8 262 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 RNF24Q9Y225 148 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 SLC45A1Q9Y2W3 748 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 WNT1P04628 370 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 C16orf47Q6ZP98 133 aaPredicted RBP11.46□□□□□ -0.57
USP38-201ENST00000307017 KDF1Q8NAX2 398 aaPredicted RBP11.46□□□□□ -0.57
USP38-201ENST00000307017 OR4C16Q8NGL9 310 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 OR14A16Q8NHC5 309 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 TXNIPQ9H3M7 391 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 ARG1P05089 322 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 FAHP16930 419 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 MDKP21741 143 aaPredicted RBP11.46□□□□□ -0.57
USP38-201ENST00000307017 TCL1AP56279 114 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 RABEPKQ7Z6M1 372 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 MYPOPQ86VE0 399 aaPredicted RBP11.46□□□□□ -0.57
USP38-201ENST00000307017 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 TIMM9Q9Y5J7 89 aa11.46□□□□□ -0.57
USP38-201ENST00000307017 FGF17O60258 216 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 C1QBP02746 253 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 RPL27P61353 136 aaKnown RBP11.46□□□□□ -0.58
USP38-201ENST00000307017 INSM1Q01101 510 aaPredicted RBP11.46□□□□□ -0.58
USP38-201ENST00000307017 RPL18Q07020 188 aaKnown RBP11.46□□□□□ -0.58
USP38-201ENST00000307017 EAF1Q96JC9 268 aaPredicted RBP11.46□□□□□ -0.58
USP38-201ENST00000307017 MS4A7Q9GZW8 240 aaPredicted RBP11.46□□□□□ -0.58
USP38-201ENST00000307017 P2RY12Q9H244 342 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 NUP98P52948 1817 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 TRDV1A0A1B0GX56 115 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 FOXE1O00358 373 aaPredicted RBP11.46□□□□□ -0.58
USP38-201ENST00000307017 COX7A2P2O60397 106 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 KIR2DL3P43628 341 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 CD276Q5ZPR3 534 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 SLC16A12Q6ZSM3 486 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 NPEPL1Q8NDH3 523 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 LHX4Q969G2 390 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 KIRREL1Q96J84 757 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 PLEKHF2Q9H8W4 249 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 FGF21Q9NSA1 209 aa11.46□□□□□ -0.58
USP38-201ENST00000307017 UBR2Q8IWV8 1755 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 HMX2A2RU54 273 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 TMPRSS11DO60235 418 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 F11P03951 625 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 ZNF595Q8IYB9 648 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 CHRM2P08172 466 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 TUSC1Q2TAM9 212 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 OR52N4Q8NGI2 321 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 ARHGDIGQ99819 225 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 OR1A1Q9P1Q5 309 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms