RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 GLYATL3Q5SZD4 288 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 PGAP1Q75T13 922 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 MRPL21Q7Z2W9 205 aaKnown RBP19.12■□□□□ 0.65
HOXD4-201ENST00000306324 FAM220AQ7Z4H9 259 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 ZCCHC24Q8N2G6 241 aaKnown RBP19.12■□□□□ 0.65
HOXD4-201ENST00000306324 OR52H1Q8NGJ2 320 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 HAVCR1Q96D42 359 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 TRMT61AQ96FX7 289 aaKnown RBP19.12■□□□□ 0.65
HOXD4-201ENST00000306324 OR10A2Q9H208 303 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 RASSF4Q9H2L5 321 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 GTF2A1LQ9UNN4 478 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 XRCC2O43543 280 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF92Q03936 586 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 MOGQ16653 247 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 C6orf141Q5SZD1 244 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF684Q5T5D7 378 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 OR2T2Q6IF00 324 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 GGHQ92820 318 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 ALG8Q9BVK2 526 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 FGF20Q9NP95 211 aaPredicted RBP19.11■□□□□ 0.65
HOXD4-201ENST00000306324 INPP5EQ9NRR6 644 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 FAM206AQ9NX38 181 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF319Q9P2F9 582 aa19.11■□□□□ 0.65
HOXD4-201ENST00000306324 PURGQ9UJV8 347 aaKnown RBP19.11■□□□□ 0.65
HOXD4-201ENST00000306324 FBXO9Q9UK97 447 aaPredicted RBP19.11■□□□□ 0.65
HOXD4-201ENST00000306324 MYO9AB2RTY4 2548 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 PLSCR5A0PG75 271 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 H7C417 338 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 NAT2P11245 290 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 PTH2RP49190 550 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 PPOXP50336 477 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 MFGE8Q08431 387 aaPredicted RBP19.1■□□□□ 0.65
HOXD4-201ENST00000306324 CDONQ4KMG0 1287 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 LIPNQ5VXI9 398 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 OR5AS1Q8N127 324 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 MRPL48Q96GC5 212 aaKnown RBP19.1■□□□□ 0.65
HOXD4-201ENST00000306324 PLCXD1Q9NUJ7 323 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 ACOXLQ9NUZ1 547 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF701Q9NV72 531 aaPredicted RBP19.1■□□□□ 0.65
HOXD4-201ENST00000306324 ERVK13-1Q9NX77 482 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 ITGB1BP2Q9UKP3 347 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 R4GMQ9 66 aa19.1■□□□□ 0.65
HOXD4-201ENST00000306324 EFCAB10A6NFE3 127 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 LOC110117498-PIK3R3F6TDL0 507 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 PNPP00491 289 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 MT-ND5P03915 603 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 TACSTD2P09758 323 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 KITLGP21583 273 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 DCKP27707 260 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 MMP16P51512 607 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 ATP5J2P56134 94 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 OR12D2P58182 307 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 ACTA2P62736 377 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 ACTG2P63267 376 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 GALEQ14376 348 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 AHSA2Q719I0 299 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF540Q8NDQ6 660 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 BHLHE23Q8NDY6 225 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 OR8B12Q8NGG6 310 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 SGK3Q96BR1 496 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 REEP6Q96HR9 211 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 MYCBPQ99417 103 aaPredicted RBP19.09■□□□□ 0.65
HOXD4-201ENST00000306324 PBOV1Q9GZY1 135 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 TPK1Q9H3S4 243 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 MS4A5Q9H3V2 200 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 Q9H521 79 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 PSORS1C1Q9UIG5 152 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 J3QLW9 94 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 SLC1A7O00341 560 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 NDUFS7O75251 213 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF19P17023 458 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 ST3GAL4Q11206 333 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 GTF3AQ92664 365 aaKnown RBP19.09■□□□□ 0.65
HOXD4-201ENST00000306324 TMEM80Q96HE8 168 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 C4orf36Q96KX1 117 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 SIGLEC11Q96RL6 698 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 REPIN1Q9BWE0 567 aaKnown RBP19.09■□□□□ 0.65
HOXD4-201ENST00000306324 GSX2Q9BZM3 304 aa19.09■□□□□ 0.65
HOXD4-201ENST00000306324 CNOT2Q9NZN8 540 aaKnown RBP19.09■□□□□ 0.65
HOXD4-201ENST00000306324 DIMT1Q9UNQ2 313 aaKnown RBP19.09■□□□□ 0.65
HOXD4-201ENST00000306324 AKAP9Q99996 3911 aa19.08■□□□□ 0.65
HOXD4-201ENST00000306324 GGT3PA6NGU5 568 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 ACOD1A6NK06 481 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 SRSF10O75494 262 aaKnown RBP19.08■□□□□ 0.64
HOXD4-201ENST00000306324 PIPP12273 146 aaPredicted RBP19.08■□□□□ 0.64
HOXD4-201ENST00000306324 MYL12AP19105 171 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 PSMB10P40306 273 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 MMP15P51511 669 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 CSNK2BP67870 215 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 MVKQ03426 396 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 BCL2L15Q5TBC7 163 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 KCTD20Q7Z5Y7 419 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 STX19Q8N4C7 294 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 PPP1R14AQ96A00 147 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 SORCS2Q96PQ0 1159 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 RAB1BQ9H0U4 201 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 OPA3Q9H6K4 179 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 MSL2Q9HCI7 577 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 SCN3BQ9NY72 215 aa19.08■□□□□ 0.64
HOXD4-201ENST00000306324 OR52A1Q9UKL2 312 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms