RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SPINT1O43278 529 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 ABOP16442 354 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 POU3F2P20265 443 aaPredicted RBP11.94□□□□□ -0.5
DDX54-201ENST00000306014 AKR1C3P42330 323 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
DDX54-201ENST00000306014 FASLGP48023 281 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 MPPED2Q15777 294 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 MESTQ5EB52 335 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 OR1S2Q8NGQ3 325 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 STT3BQ8TCJ2 826 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 DTX4Q9Y2E6 619 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 OIP5O43482 229 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 ATG12O94817 140 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 ZNF44P15621 663 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 PCK2Q16822 640 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 TMEM128Q5BJH2 165 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 ARTNQ5T4W7 220 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
DDX54-201ENST00000306014 ZNF100Q8IYN0 542 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 C11orf40Q8WZ69 217 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 SLC25A31Q9H0C2 315 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 FBXO7Q9Y3I1 522 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 UNC13CQ8NB66 2214 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 SHISA8B8ZZ34 492 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 RPL12P30050 165 aaKnown RBP11.94□□□□□ -0.5
DDX54-201ENST00000306014 SFTPA2Q8IWL1 248 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 OR51A2Q8NGJ7 313 aa11.94□□□□□ -0.5
DDX54-201ENST00000306014 TMEM184BQ9Y519 407 aaPredicted RBP11.94□□□□□ -0.5
DDX54-201ENST00000306014 ANKRD36A6QL64 1941 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 RECKO95980 971 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 CD79AP11912 226 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 RPA2P15927 270 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 IDH3GP51553 393 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 HMGN3Q15651 99 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 TOMM34Q15785 309 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 SLC16A14Q7RTX9 510 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 OR9K2Q8NGE7 335 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 OR5M9Q8NGP3 310 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 PAPOLGQ9BWT3 736 aaKnown RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 GDF2Q9UK05 429 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 PADI1Q9ULC6 663 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 FAM221AA4D161 298 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 C5orf67F2Z3F1 127 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 TRIM77I1YAP6 450 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 ALOX12BO75342 701 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 JTBO76095 146 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 TBPP20226 339 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 CDAP32320 146 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 SCAND1P57086 179 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 GRB2P62993 217 aaKnown RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 DCDP81605 110 aaKnown RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 OPN5Q6U736 354 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 OR52H1Q8NGJ2 320 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 HAS2Q92819 552 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 SPACA1Q9HBV2 294 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 KCNE5Q9UJ90 142 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 PURGQ9UJV8 347 aaKnown RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 A6NLC8 198 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 NXPH3O95157 252 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 ABCD3P28288 659 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 TAF9Q16594 264 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 NKAIN1Q4KMZ8 207 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 LAMTOR1Q6IAA8 161 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 FIP1L1Q6UN15 594 aaKnown RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 ATOH1Q92858 354 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 C8orf44Q96CB5 159 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 KLHDC2Q9Y2U9 406 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 SIT1Q9Y3P8 196 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 KPTNQ9Y664 436 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 B3GALNT1O75752 331 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 MPC2O95563 127 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 GUSBP08236 651 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 ZNF121P58317 390 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 HNF4GQ14541 408 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 TMEM65Q6PI78 240 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 OR5M8Q8NGP6 311 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
DDX54-201ENST00000306014 C2orf50Q96LR7 162 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 LRRC61Q9BV99 259 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 RHOFQ9HBH0 211 aa11.93□□□□□ -0.5
DDX54-201ENST00000306014 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 SMCO3A2RU48 225 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 DCTN6O00399 190 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 MSTNO14793 375 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 LRP3O75074 770 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 SLC34A2O95436 690 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 NAT1P18440 290 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 GABRG2P18507 467 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 OR2B8PP59922 312 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 THEM4Q5T1C6 240 aa11.92□□□□□ -0.5
DDX54-201ENST00000306014 ATPAF1Q5TC12 328 aaPredicted RBP11.92□□□□□ -0.5
DDX54-201ENST00000306014 TMEM164Q5U3C3 297 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms