RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 TSSK6Q9BXA6 273 aa13.96□□□□□ -0.17
TRAPPC1-201ENST00000303731 PLA2G12AQ9BZM1 189 aa13.96□□□□□ -0.17
TRAPPC1-201ENST00000303731 TRIM36Q9NQ86 728 aa13.96□□□□□ -0.17
TRAPPC1-201ENST00000303731 MRPL15Q9P015 296 aaKnown RBP13.96□□□□□ -0.17
TRAPPC1-201ENST00000303731 COMMD3-BMI1R4GMX3 469 aa13.96□□□□□ -0.17
TRAPPC1-201ENST00000303731 TCRBV5S2A0A599 114 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 CD300LBA8K4G0 201 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 PHYHO14832 338 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 HLA-DPB1P04440 258 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 ENTPD1P49961 510 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 SLC25A1P53007 311 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 HNRNPA0Q13151 305 aaKnown RBP13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 MAB21L1Q13394 359 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 OR8G1Q15617 311 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 MICAQ29983 383 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 TEX30Q5JUR7 227 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF362Q5T0B9 420 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 OR2T5Q6IEZ7 315 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 DCXRQ7Z4W1 244 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 OR2T29Q8NH02 315 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 RAB40AQ8WXH6 277 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 NSL1Q96IY1 281 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 COPS4Q9BT78 406 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 SP140LQ9H930 580 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 FN3KRPQ9HA64 309 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 CLN8Q9UBY8 286 aa13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 PRPF19Q9UMS4 504 aaKnown RBP13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 SAMHD1Q9Y3Z3 626 aaKnown RBP13.95□□□□□ -0.18
TRAPPC1-201ENST00000303731 IGHV2-70DA0A0C4DH43 119 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 GGT3PA6NGU5 568 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 TVP23AA6NH52 213 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 RIIAD1A6NNX1 92 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF878C9JN71 531 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 XRCC2O43543 280 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 PTBP3O95758 552 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF3P17036 446 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 HOXB6P17509 224 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 CALB2P22676 271 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 SLC15A1P46059 708 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 MTNR1AP48039 350 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 PITPNBP48739 271 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 NPY4RP50391 375 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 GYS2P54840 703 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 GRB2P62993 217 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 PAX2Q02962 417 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 TAF13Q15543 124 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 C9orf139Q6ZV77 190 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 NAA40Q86UY6 237 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 OR8D4Q8NGM9 314 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 OR10S1Q8NGN2 331 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 C22orf15Q8WYQ4 148 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 KCNJ15Q99712 375 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 ADAT1Q9BUB4 502 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 NMNAT2Q9BZQ4 307 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 TOR3AQ9H497 397 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 ESM1Q9NQ30 184 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 RNF7Q9UBF6 113 aa13.94□□□□□ -0.18
TRAPPC1-201ENST00000303731 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 NDUFA2O43678 99 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF205O95201 554 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 APOC1P02654 83 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 SPARCP09486 303 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 RAP2AP10114 183 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 SPI1P17947 270 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 CA6P23280 308 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 PRTN3P24158 256 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 CD80P33681 288 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 DDOSTP39656 456 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 PMELP40967 661 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF92Q03936 586 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 DBPQ10586 325 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 FOXL1Q12952 345 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 CRMP1Q14194 572 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 SNAI3Q3KNW1 292 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 KLF17Q5JT82 389 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 CD300LDQ6UXZ3 194 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 RHOUQ7L0Q8 258 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 PARP8Q8N3A8 854 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 SIGLECL1Q8N7X8 197 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 OR9Q1Q8NGQ5 310 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 SGMS2Q8NHU3 365 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 UPRTQ96BW1 309 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 SLAMF6Q96DU3 332 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 ASB9Q96DX5 294 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 LRGUKQ96M69 825 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 CCT8L2Q96SF2 557 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 MS4A7Q9GZW8 240 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 CMC2Q9NRP2 79 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF69Q9UC07 566 aa13.93□□□□□ -0.18
TRAPPC1-201ENST00000303731 IGHV3-64DA0A0J9YX35 117 aa13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 KIR2DS1A0A191URI9 304 aa13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 ARRDC5A6NEK1 342 aa13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 CLDN34H7C241 214 aa13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 ZNF593O00488 134 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 FAM20BO75063 409 aa13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 RBMXP38159 391 aaKnown RBP13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 RPS27P42677 84 aaKnown RBP13.92□□□□□ -0.18
TRAPPC1-201ENST00000303731 BPIFB3P59826 476 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms