RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SIX1Q15475 284 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 LRRC26Q2I0M4 334 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 LIPNQ5VXI9 398 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 HSD17B13Q7Z5P4 300 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 SLC39A11Q8N1S5 342 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM40Q8WWA1 233 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 C12orf57Q99622 126 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 NXF2Q9GZY0 626 aaKnown RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 FBXO4Q9UKT5 387 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PHRF1Q9P1Y6 1649 aaKnown RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 A0A1W2PNV4 684 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PI3P19957 117 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PIGAP37287 484 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PPOXP50336 477 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 OR1D5P58170 312 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 MOGAT2Q3SYC2 334 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 SLC48A1Q6P1K1 146 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 ZDHHC23Q8IYP9 409 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TCTEX1D1Q8N7M0 179 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF485Q8NCK3 441 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TM4SF18Q96CE8 201 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 NEURL3Q96EH8 262 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 NIPSNAP1Q9BPW8 284 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 ONECUT1Q9UBC0 465 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TRAPPC4Q9Y296 219 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 MYH7BA7E2Y1 1941 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 MYH3P11055 1940 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TRGV10A0A0A0MS01 117 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SULT1A1P50225 295 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 IQCJQ1A5X6 159 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF750Q32MQ0 723 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 Q3ZCU0 254 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 GSX1Q9H4S2 264 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 OCEL1Q9H607 264 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 CLEC2DQ9UHP7 191 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF260Q3ZCT1 412 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SOWAHCQ53LP3 525 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SCGB1D4Q6XE38 83 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 LYSMD2Q8IV50 215 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 CXorf58Q96LI9 332 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SMIM14Q96QK8 99 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 DNPH1O43598 174 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 T-ENOLP0DO92 83 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 HIST1H3AP68431 136 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 CORO6Q6QEF8 472 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SPRED1Q7Z699 444 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM116Q8NCL8 245 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 PCED1AQ9H1Q7 454 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SIAEQ9HAT2 523 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 PHLPP1O60346 1717 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 C1QBP02746 253 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SEMG1P04279 462 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 CRISP2P16562 243 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SRP14P37108 136 aaKnown RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 HAAOP46952 286 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 GAMTQ14353 236 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SMIM21Q3B7S5 101 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 TRMT12Q53H54 448 aaKnown RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 LRRC10Q5BKY1 277 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 COX20Q5RI15 118 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 FCRL6Q6DN72 434 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 SLC16A12Q6ZSM3 486 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 MICAL3Q7RTP6 2002 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 NDUFB3O43676 98 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 B4GALT3O60512 393 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 RAF1P04049 648 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 PIGPP57054 158 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 ALKBH6Q3KRA9 238 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 RELL2Q8NC24 303 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 DTD1Q8TEA8 209 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 GALMQ96C23 342 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 MISP3Q96FF7 219 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 ADGRL4Q9HBW9 690 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 GPR84Q9NQS5 396 aa9.44□□□□□ -0.9
CLIP1-201ENST00000302528 RCL1Q9Y2P8 373 aaKnown RBP9.44□□□□□ -0.9
CLIP1-201ENST00000302528 AKAP11Q9UKA4 1901 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SHISA7A6NL88 538 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 RNF224P0DH78 156 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 CD1BP29016 333 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SLC19A1P41440 591 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 HERVK_113P61574 105 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF252P-AS1Q0IIN9 211 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF141Q15928 474 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SLCO4C1Q6ZQN7 724 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 BAP18Q8IXM2 172 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 OR13F1Q8NGS4 319 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TTC9Q92623 222 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 C2orf50Q96LR7 162 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM56Q96MV1 263 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 FIZ1Q96SL8 496 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ZIC5Q96T25 663 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 NUMBLQ9Y6R0 609 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 MS4A18H0YCH9 400 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms