RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 OR4C5Q8NGB2 326 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 S1PR3Q99500 378 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 ZDHHC11Q9H8X9 412 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 RHOFQ9HBH0 211 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PDFQ9HBH1 243 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 PISDQ9UG56 409 aa6.95□□□□□ -1.3
SF3B3-201ENST00000302516 FRG2CA6NGY1 282 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ALOX12BO75342 701 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ABLIM3O94929 683 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 NDUFB6O95139 128 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 OR4C16Q8NGL9 310 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 MVB12AQ96EY5 273 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 OXGR1Q96P68 337 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 KIAA1456Q9P272 454 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF107Q9UII5 783 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 COA3Q9Y2R0 106 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PLRG1O43660 514 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TSPAN12O95859 305 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SLC19A1P41440 591 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PRTGQ2VWP7 1150 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TPPP3Q9BW30 176 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 OCEL1Q9H607 264 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 UNC13CQ8NB66 2214 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PNPP00491 289 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 OR2B8PP59922 312 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PRAMEF5Q5TYX0 476 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PRAMEF6Q5VXH4 476 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SIGIRRQ6IA17 410 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PRSS45Q7RTY3 260 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM123Q8N131 208 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 OR5B3Q8NH48 314 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 MRPL38Q96DV4 380 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 MRPS2Q9Y399 296 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ASCC3Q8N3C0 2202 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 LRP3O75074 770 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PGA3P0DJD8 388 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PTGER1P34995 402 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PIGTQ969N2 578 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 KCND3Q9UK17 655 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ADAMTS7Q9UKP4 1686 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TRBV5-4A0A0C4DH59 114 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 BMI1P35226 326 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 GPNMBQ14956 572 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 MARCH3Q86UD3 253 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PBOV1Q9GZY1 135 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SHARPINQ9H0F6 387 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SERTM1A2A2V5 107 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 M0R082 166 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 M0R135 149 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 AKR1C3P42330 323 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TRAT1Q6PIZ9 186 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CALHM3Q86XJ0 350 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ZDHHC23Q8IYP9 409 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF799Q96GE5 643 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF845Q96IR2 970 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SLIRPQ9GZT3 109 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SLC35B3Q9H1N7 401 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 A0A0U1RQS6 177 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 RNASEK-C17orf49H0YIS7 233 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 GALR2O43603 387 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 IGLV3-27P01718 113 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SULT1A3P0DMM9 295 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SULT1A4P0DMN0 295 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 P2RX3P56373 397 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CLPPQ16740 277 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM81Q6P7N7 255 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CD300LDQ6UXZ3 194 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 RHOUQ7L0Q8 258 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 AMIGO3Q86WK7 504 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PCNPQ8WW12 178 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 Q96M85 177 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CREBZFQ9NS37 354 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 TMED3Q9Y3Q3 217 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 PSME4Q14997 1843 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SEC16AO15027 2179 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 LINC01387J3KSC0 135 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CCSO14618 274 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 GJA4P35212 333 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 MAT1AQ00266 395 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 RPL18Q07020 188 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 C12orf73Q69YU5 71 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CLEC9AQ6UXN8 241 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 SHISA6Q6ZSJ9 500 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 OR10X1Q8NGY0 326 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 GPR119Q8TDV5 335 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 ZMAT3Q9HA38 289 aaKnown RBP6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CLCF1Q9UBD9 225 aa6.94□□□□□ -1.3
SF3B3-201ENST00000302516 CNIH1O95406 144 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 DMWDQ09019 674 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM268Q5VZI3 342 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 THNSL2Q86YJ6 484 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 KIAA1958Q8N8K9 716 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 OR4S1Q8NGB4 309 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 FBXW5Q969U6 566 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 ARRDC3Q96B67 414 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 CCDC74BQ96LY2 380 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 MANBALQ9NQG1 85 aa6.93□□□□□ -1.3
SF3B3-201ENST00000302516 PSENENQ9NZ42 101 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms