RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 SUSD2Q9UGT4 822 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 FBXO9Q9UK97 447 aaPredicted RBP12.04□□□□□ -0.48
CTTN-201ENST00000301843 A8MVM7 634 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 RAD51DO75771 328 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 ARL4DP49703 201 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 POLR2HP52434 150 aaKnown RBP12.04□□□□□ -0.48
CTTN-201ENST00000301843 TLE3Q04726 772 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 FDX2Q6P4F2 183 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 ZNF248Q8NDW4 579 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 SLAMF6Q96DU3 332 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 PRRT1Q99946 306 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 SMIM3Q9BZL3 60 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 VSX1Q9NZR4 365 aaPredicted RBP12.04□□□□□ -0.48
CTTN-201ENST00000301843 ZNF319Q9P2F9 582 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 MMP17Q9ULZ9 603 aa12.04□□□□□ -0.48
CTTN-201ENST00000301843 NCOA6Q14686 2063 aaPredicted RBP12.04□□□□□ -0.48
CTTN-201ENST00000301843 H7C2Y5 167 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 FBXO24O75426 580 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 SRSF10O75494 262 aaKnown RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 DXOO77932 396 aaKnown RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 KNG1P01042 644 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 PSMB6P28072 239 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 AIMP2Q13155 320 aaKnown RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 ZNF813Q6ZN06 617 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 ABHD12BQ7Z5M8 362 aaPredicted RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 PNLDC1Q8NA58 520 aaKnown RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 DNTTIP1Q9H147 329 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 CRHP06850 196 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 PVALBP20472 110 aaPredicted RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 KCNJ3P48549 501 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 SCAND1P57086 179 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 TDGQ13569 410 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 PLAC9Q5JTB6 97 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 KIAA0895LQ68EN5 471 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 ZNF585AQ6P3V2 769 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 SLC29A4Q7RTT9 530 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 OR10S1Q8NGN2 331 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 OR1L3Q8NH93 324 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 RNF126Q9BV68 326 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 PURGQ9UJV8 347 aaKnown RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 ALG1L2C9J202 215 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 TSPAN2O60636 221 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 SERPINA5P05154 406 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 SFTPBP07988 381 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 FOLR1P15328 257 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 CBR1P16152 277 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 NME2P22392 152 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 GLRA1P23415 457 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 ZNF93P35789 620 aaPredicted RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 TGIF1Q15583 401 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 PABPC1L2AQ5JQF8 200 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 OR1M1Q8NGA1 313 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 GPER1Q99527 375 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 PBOV1Q9GZY1 135 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 C8orf33Q9H7E9 229 aaPredicted RBP12.03□□□□□ -0.48
CTTN-201ENST00000301843 SCPEP1Q9HB40 452 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 RHBDD3Q9Y3P4 386 aa12.03□□□□□ -0.48
CTTN-201ENST00000301843 A0A1B0GV50 99 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 SLC6A8P48029 635 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 CCR5P51681 352 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 PNLIPRP2P54317 469 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 SCRN3Q0VDG4 424 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 SGCAQ16586 387 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 DRAM2Q6UX65 266 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 OR10H5Q8NGA6 315 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 PIK3IP1Q96FE7 263 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 LIN37Q96GY3 246 aaPredicted RBP12.02□□□□□ -0.48
CTTN-201ENST00000301843 OR10C1Q96KK4 312 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.02□□□□□ -0.48
CTTN-201ENST00000301843 VN1R1Q9GZP7 353 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 ESRP2Q9H6T0 727 aaKnown RBP12.02□□□□□ -0.48
CTTN-201ENST00000301843 METTL8Q9H825 291 aaKnown RBP12.02□□□□□ -0.48
CTTN-201ENST00000301843 SLC17A5Q9NRA2 495 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 GPR27Q9NS67 375 aa12.02□□□□□ -0.48
CTTN-201ENST00000301843 RER1O15258 196 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 SIGLEC6O43699 453 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 NPIPB7O75200 414 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 HCKP08631 526 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 ARFRP1Q13795 201 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 OR10Z1Q8NGY1 313 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 ARHGAP5-AS1Q96IT6 56 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 COPS7AQ9UBW8 275 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 RAB22AQ9UL26 194 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
CTTN-201ENST00000301843 A0A1B0GW55 424 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 RAMP1O60894 148 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 CRTAPO75718 401 aaPredicted RBP12.01□□□□□ -0.49
CTTN-201ENST00000301843 DUX4L2P0CJ85 424 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 DUX4L3P0CJ86 424 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 DUX4L4P0CJ87 422 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 DUX4L5P0CJ88 424 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 DUX4L6P0CJ89 424 aa12.01□□□□□ -0.49
CTTN-201ENST00000301843 DUX4L7P0CJ90 424 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms