RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SPOCK1Q08629 439 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 P2RY14Q15391 338 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 TMEM53Q6P2H8 277 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 Q8N402 240 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 POC5Q8NA72 575 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 PLPP7Q8NBV4 271 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 TMEM138Q9NPI0 162 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 OR5V1Q9UGF6 321 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 CNOT4O95628 575 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 COX5BP10606 129 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 BDKRB2P30411 391 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 NR4A2P43354 598 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 CXADRP78310 365 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 PITPNAQ00169 270 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 TGFBR3Q03167 851 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 MADCAM1Q13477 382 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 BAK1Q16611 211 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 SFRP5Q5T4F7 317 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 PYHIN1Q6K0P9 492 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 UNQ6494/PRO21346Q6UXR6 183 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 TFAP2EQ6VUC0 442 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 C9orf106Q8NAJ2 232 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 OR1M1Q8NGA1 313 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 OR1K1Q8NGR3 316 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 SETD6Q8TBK2 473 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 RAB40AQ8WXH6 277 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 NANOS1Q8WY41 292 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 ZNF224Q9NZL3 707 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 ZNF391Q9UJN7 358 aa13.72□□□□□ -0.21
HERPUD1-201ENST00000300302 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 DMXL2Q8TDJ6 3036 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 A0A0G2JMP0 313 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 A0A0X1KG70 313 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 WDR1O75083 606 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 DHRS3O75911 302 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 UBL3O95164 117 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 HLA-HP01893 362 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 LCATP04180 440 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 ITGA5P08648 1049 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OCMP0CE72 109 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 CD37P11049 281 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 CD79AP11912 226 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 ABOP16442 354 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 HTR2CP28335 458 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 PTGER4P35408 488 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 CAPZA1P52907 286 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 ART1P52961 327 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OXA1LQ15070 435 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 TRIQKQ629K1 86 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 CNEP1R1Q8N9A8 125 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OR4M2Q8NGB6 313 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OR51A2Q8NGJ7 313 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OR6M1Q8NGM8 313 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OR6K3Q8NGY3 331 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 OR14K1Q8NGZ2 314 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 C10orf35Q96D05 121 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 S100A16Q96FQ6 103 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 ABCG5Q9H222 651 aa13.71□□□□□ -0.21
HERPUD1-201ENST00000300302 A6NIN4 97 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 FIGNL2A6NMB9 653 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 E9PLN8 166 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 PTTG1O95997 202 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 IL18BPO95998 194 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 CSF3P09919 207 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 ANOS1P23352 680 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 RANBP1P43487 201 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 PLP2Q04941 152 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SNAI3Q3KNW1 292 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 GLYATL3Q5SZD4 288 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 ZNF529Q6P280 563 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 CMTM4Q8IZR5 234 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 JAGN1Q8N5M9 183 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 CPEB3Q8NE35 698 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 COX4I2Q96KJ9 171 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 LYZL4Q96KX0 146 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SORCS2Q96PQ0 1159 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 RGCCQ9H4X1 137 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 V9GYS6 101 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 ACACAQ13085 2346 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 A0A1W2PQ09 198 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SULT1B1O43704 296 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 PER3P56645 1201 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 RAB1AP62820 205 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 Q6ZSR3 168 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 Q6ZT83 130 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 C19orf18Q8NEA5 215 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 OR13C9Q8NGT0 318 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SYNPRQ8TBG9 265 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SNRNP27Q8WVK2 155 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 BCL2L2Q92843 193 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 FAM3DQ96BQ1 224 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SGK3Q96BR1 496 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SLC25A38Q96DW6 304 aa13.7□□□□□ -0.22
HERPUD1-201ENST00000300302 SOX7Q9BT81 388 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms