RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 GPR32P1Q8NGA4 272 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DERL3Q96Q80 235 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GDF2Q9UK05 429 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TARM1B6A8C7 271 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ANGPTL7O43827 346 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC6A12P48065 614 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ONECUT1Q9UBC0 465 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NDRG4Q9ULP0 352 aaKnown RBP12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MT-ND4LP03901 98 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FAHP16930 419 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ARR3P36575 388 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF230Q9UIE0 474 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 R4GMQ9 66 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM129A0AVI4 362 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DSCR3O14972 297 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PLRG1O43660 514 aaKnown RBP12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ONECUT2O95948 504 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 JUNBP17275 347 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 INSL4Q14641 139 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MPPED2Q15777 294 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SLC25A43Q8WUT9 341 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OXGR1Q96P68 337 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
CHRFAM7A-201ENST00000299847 UBE2L5PA0A1B0GUS4 154 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MED19A0JLT2 244 aaPredicted RBP12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 LALBAP00709 142 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FGF7P21781 194 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PCK2Q16822 640 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 RPUSD3Q6P087 351 aaKnown RBP12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 PLSCR3Q9NRY6 295 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NCBP2LA6PVI3 153 aaKnown RBP12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 OR4E1P0C645 316 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ETV6P41212 452 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KIR2DS4P43632 304 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KIR2DS1Q14954 304 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DTWD2Q8NBA8 298 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ERGIC1Q969X5 290 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SIGLEC11Q96RL6 698 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ZNF768Q9H5H4 540 aaKnown RBP12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NIT2Q9NQR4 276 aa12.27□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GABRB1P18505 474 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF787Q6DD87 383 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 BTNL8Q6UX41 500 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 GABARAPL3Q9BY60 117 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FSCN3Q9NQT6 498 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PPM1DO15297 605 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FAM122BQ7Z309 247 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ACY3Q96HD9 319 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR8B4Q96RC9 309 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PHF7Q9BWX1 381 aaPredicted RBP12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 A0A1B0GUL6 1792 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CHRM2P08172 466 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 BMP5P22003 454 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FOXB2Q5VYV0 432 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 KIRREL2Q6UWL6 708 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR2AK2Q8NG84 335 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SLC22A20A6NK97 555 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CYTIPO60759 359 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 AQP8O94778 261 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CAPZBP47756 277 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 DIO1P49895 249 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR13D1Q8NGV5 346 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 C12orf10Q9HB07 376 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 GPR31O00270 319 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TNFRSF10CO14798 259 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PRSS12P56730 875 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PRDX4Q13162 271 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SELENBP1Q13228 472 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TCTN1Q2MV58 587 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 WDR88Q6ZMY6 472 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CLEC5AQ9NY25 188 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FBXL4Q9UKA2 621 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF727A8MUV8 499 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 GIPP09681 153 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SLC17A1Q14916 467 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CYHR1Q6ZMK1 362 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 C11orf42Q8N5U0 333 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ANKRD53Q8N9V6 530 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZBTB44Q8NCP5 570 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 IGHV3-13P01766 116 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms