RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 LCATP04180 440 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 CA6P23280 308 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 GGT2P36268 569 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 GSK3BP49841 420 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 OR8G1Q15617 311 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 C8orf82Q6P1X6 216 aaPredicted RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 MRPL21Q7Z2W9 205 aaKnown RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 ZBTB46Q86UZ6 589 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 PNLDC1Q8NA58 520 aaKnown RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 SLCO4A1Q96BD0 722 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 DHRS1Q96LJ7 313 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 ERMAPQ96PL5 475 aaPredicted RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 NMNAT3Q96T66 252 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 RBM4BQ9BQ04 359 aaKnown RBP13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 TRIM15Q9C019 465 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 SIRPDQ9H106 197 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 CYB5R1Q9UHQ9 305 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 RNF114Q9Y508 228 aa13.23□□□□□ -0.29
TMEM41A-201ENST00000296254 IGHV1-69DA0A0B4J2H0 117 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 M0R135 149 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 ADAM20O43506 726 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 GPR137BO60478 399 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 IGHV1-69P01742 117 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 RHCEP18577 417 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 HDXQ7Z353 690 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 LINC01006Q8NI28 216 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 TBC1D15Q8TC07 691 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 UBE2FQ969M7 185 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 ZNF799Q96GE5 643 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 PKP2Q99959 881 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 FUZQ9BT04 418 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 TRIM36Q9NQ86 728 aa13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 RPRD1BQ9NQG5 326 aaKnown RBP13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 FAM32AQ9Y421 112 aaKnown RBP13.22□□□□□ -0.29
TMEM41A-201ENST00000296254 TRAV38-1A0A0B4J264 116 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 OOEPA6NGQ2 149 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 ARPC3O15145 178 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 NDUFA2O43678 99 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 FCN3O75636 299 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 CLPXO76031 633 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 RENP00797 406 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 NCK1P16333 377 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 HIST1H1CP16403 213 aaKnown RBP13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 SLC6A6P31641 620 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 PROK1P58294 105 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 OR8B8Q15620 311 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 SNAI3Q3KNW1 292 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 SLC36A3Q495N2 470 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 BOLLQ8N9W6 283 aaKnown RBP13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 OR4K13Q8NH42 304 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 LHX4Q969G2 390 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 MAP6Q96JE9 813 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 C7orf34Q96L11 122 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 KCTD14Q9BQ13 255 aaPredicted RBP13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 OR52D1Q9H346 318 aa13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 MRPL15Q9P015 296 aaKnown RBP13.21□□□□□ -0.29
TMEM41A-201ENST00000296254 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 GMDSO60547 372 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 DIRAS1O95057 198 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 ANOS1P23352 680 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 OTX1P32242 354 aaPredicted RBP13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 IER3P46695 156 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 TPTEP56180 551 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 ZNF92Q03936 586 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 RFX4Q33E94 735 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 C11orf91Q3C1V1 193 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 FAM90A1Q86YD7 464 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 OR52J3Q8NH60 311 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 FN3KQ9H479 309 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 MRPL22Q9NWU5 206 aaKnown RBP13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 ABCD2Q9UBJ2 740 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 KCNG2Q9UJ96 466 aa13.2□□□□□ -0.3
TMEM41A-201ENST00000296254 OR6C68A6NDL8 312 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 SLC22A31A6NKX4 558 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 OR10H3O60404 316 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 TSPAN15O95858 294 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 HLA-DQA2P01906 255 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 GYPAP02724 150 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 COX4I1P13073 169 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 TAF9Q16594 264 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 BTN2A1Q7KYR7 527 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
TMEM41A-201ENST00000296254 GCSAMQ8N6F7 178 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms