RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SBF2Q86WG5 1849 aa15.92■□□□□ 0.14
CDC42EP3-201ENST00000295324 ATAD5Q96QE3 1844 aa15.92■□□□□ 0.14
CDC42EP3-201ENST00000295324 M0QYG6 137 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 CRYZL1O95825 349 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 FUT6P51993 359 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 RAC3P60763 192 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 TATDN3Q17R31 274 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 DRAM2Q6UX65 266 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 KANSL1Q7Z3B3 1105 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 PP6455Q8WZ26 134 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SEH1LQ96EE3 360 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SLC6A13Q9NSD5 602 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 RBFOX1Q9NWB1 397 aaKnown RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 MBD1Q9UIS9 605 aaPredicted RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 A3GALT2U3KPV4 340 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 MRM1Q6IN84 353 aaKnown RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SLC38A9Q8NBW4 561 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF391Q9UJN7 358 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 ING1Q9UK53 422 aaPredicted RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 TERTO14746 1132 aaKnown RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 APEHP13798 732 aaKnown RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 RAB13P51153 203 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SLC25A1P53007 311 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SHEQ5VZ18 495 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 RND1Q92730 232 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF486Q96H40 463 aaPredicted RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 ARPC3O15145 178 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 CMTM4Q8IZR5 234 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 UGT2A1Q9Y4X1 527 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 WDR90Q96KV7 1748 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 A0A1W2PQD3 144 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 LGALS8O00214 317 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SULT1C2O00338 296 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 SPRY3O43610 288 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 TMPRSS7Q7RTY8 843 aa15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 FGF20Q9NP95 211 aaPredicted RBP15.91■□□□□ 0.14
CDC42EP3-201ENST00000295324 RAB4AP20338 218 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 SPATA46Q5T0L3 261 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF546Q86UE3 836 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 OTOSQ8NHW6 89 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 FER1L6Q2WGJ9 1857 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 PTBP1P26599 531 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 PRR7Q8TB68 274 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 DUSP21Q9H596 190 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 PILRBQ9UKJ0 227 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 A8MXE2 369 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 HSD17B6O14756 317 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 CCR9P51686 369 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 C21orf58P58505 322 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 FUT7Q11130 342 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 PHLDA2Q53GA4 152 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 HEPHL1Q6MZM0 1159 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 BRICD5Q6PL45 260 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 SEC16AO15027 2179 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 A0A1W2PS29 197 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 THBS4P35443 961 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 SUB1P53999 127 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 OR2AE1Q8NHA4 323 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 DVL3Q92997 716 aaPredicted RBP15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 OR8B4Q96RC9 309 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 GNG13Q9P2W3 67 aa15.9■□□□□ 0.14
CDC42EP3-201ENST00000295324 A0A1W2PPV9 198 aa15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 OR2M5A3KFT3 312 aa15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 MAGEB4O15481 346 aaPredicted RBP15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 GPR12P47775 334 aa15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 SIAH3Q8IW03 269 aa15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 SPACA5Q96QH8 159 aa15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 NDUFB11Q9NX14 153 aa15.89■□□□□ 0.14
CDC42EP3-201ENST00000295324 A0A0U1RQK1 487 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 TCRBV16S1A1N1A0A5B0 115 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A6P0DMU7 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A5P0DMU8 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A7P0DMV0 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A8P0DMV1 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A9P0DMV2 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 NPY4RP50391 375 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 TAF9Q16594 264 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A2Q5DJT8 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A1Q5HYN5 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 LACC1Q8IV20 430 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 GABRG1Q8N1C3 465 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CT45A3Q8NHU0 189 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 DNASE2BQ8WZ79 361 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CHST2Q9Y4C5 530 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 DOCK3Q8IZD9 2030 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 GMDSO60547 372 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 GAB4Q2WGN9 574 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 H2BFWTQ7Z2G1 175 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 SLC36A1Q7Z2H8 476 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 TMEM179BQ7Z7N9 219 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 AIPO00170 330 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 RPS19P39019 145 aaKnown RBP15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 SSX2Q16385 188 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 CTU2Q2VPK5 515 aaKnown RBP15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 ATPAF1Q5TC12 328 aaPredicted RBP15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 OR6K3Q8NGY3 331 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 TEX51A0A1B0GUA7 166 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 TPPPO94811 219 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 FABP1P07148 127 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms