RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 TMEM14DPA8MWL7 114 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 NME1P15531 152 aaKnown RBP17.05■□□□□ 0.32
LSM12-201ENST00000293406 ADCYAP1P18509 176 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 AIMP2Q13155 320 aaKnown RBP17.05■□□□□ 0.32
LSM12-201ENST00000293406 GUCA2BQ16661 112 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 PTCRAQ6ISU1 281 aaPredicted RBP17.05■□□□□ 0.32
LSM12-201ENST00000293406 BAP18Q8IXM2 172 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 SLC30A7Q8NEW0 376 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 ARL11Q969Q4 196 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 C5orf34Q96MH7 638 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 NICN1Q9BSH3 213 aa17.05■□□□□ 0.32
LSM12-201ENST00000293406 TRBV6-7A0A0A0MS04 114 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 A0A0B4J2A0 478 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 ZNF217O75362 1048 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 H2AFB1P0C5Y9 115 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 SCRN3Q0VDG4 424 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 TMEM128Q5BJH2 165 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 TMEM71Q6P5X7 295 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 HAGHLQ6PII5 290 aaPredicted RBP17.04■□□□□ 0.32
LSM12-201ENST00000293406 LDLRAD3Q86YD5 345 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 OR2I1PQ8NGU4 316 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 TERB2Q8NHR7 220 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 RNF141Q8WVD5 230 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 RNF126Q9BV68 326 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 VN1R1Q9GZP7 353 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 CHST11Q9NPF2 352 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 FBLN5Q9UBX5 448 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 SHPKQ9UHJ6 478 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 NPIPB13A6NJU9 1138 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 NPIPB4C9JG80 1138 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 ADAM10O14672 748 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 ACTL6AO96019 429 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 CHRM2P08172 466 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 NAAAQ02083 359 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 SHHQ15465 462 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 PNLIPRP3Q17RR3 467 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 DEFB133Q30KQ1 61 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 NKAPLQ5M9Q1 402 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 OR1L3Q8NH93 324 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 ST8SIA1Q92185 356 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 CDC6Q99741 560 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 EMC6Q9BV81 110 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 TMEM100Q9NV29 134 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 ZNF629Q9UEG4 869 aaPredicted RBP17.04■□□□□ 0.32
LSM12-201ENST00000293406 VCANP13611 3396 aa17.04■□□□□ 0.32
LSM12-201ENST00000293406 COL5A1P20908 1838 aaPredicted RBP17.04■□□□□ 0.32
LSM12-201ENST00000293406 F8W036 122 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 CD79AP11912 226 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 ZNF20P17024 532 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 BLOC1S1P78537 153 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 MICBQ29980 383 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 C1orf189Q5VU69 101 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 ZNF529Q6P280 563 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 Q6ZS52 159 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 TMPPEQ6ZT21 453 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 LANCL3Q6ZV70 420 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 MISPQ8IVT2 679 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 TMED6Q8WW62 240 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 RRNAD1Q96FB5 475 aaKnown RBP17.03■□□□□ 0.32
LSM12-201ENST00000293406 SPACA5Q96QH8 159 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 LPAR5Q9H1C0 372 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 SUSD2Q9UGT4 822 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 PCDH15Q96QU1 1955 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 ANKUB1A6NFN9 424 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 BIDP55957 195 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 GPR85P60893 370 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 HSD11B2P80365 405 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
LSM12-201ENST00000293406 ZSCAN4Q8NAM6 433 aaPredicted RBP17.03■□□□□ 0.32
LSM12-201ENST00000293406 OR51E1Q8TCB6 317 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 ADAT1Q9BUB4 502 aaKnown RBP17.03■□□□□ 0.32
LSM12-201ENST00000293406 MLXQ9UH92 298 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 ATXN7L1Q9ULK2 861 aaPredicted RBP17.03■□□□□ 0.32
LSM12-201ENST00000293406 VDAC3Q9Y277 283 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 SEC16AO15027 2179 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 RP1P56715 2156 aa17.03■□□□□ 0.32
LSM12-201ENST00000293406 PCP4L1A6NKN8 68 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 APOBEC1P41238 236 aaKnown RBP17.02■□□□□ 0.32
LSM12-201ENST00000293406 SGCAQ16586 387 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 GLIPR1L1Q6UWM5 242 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 OR10S1Q8NGN2 331 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 RAB3CQ96E17 227 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 TMEM41AQ96HV5 264 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 ZC3H10Q96K80 434 aaKnown RBP17.02■□□□□ 0.32
LSM12-201ENST00000293406 RAB33BQ9H082 229 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 CYTL1Q9NRR1 136 aa17.02■□□□□ 0.32
LSM12-201ENST00000293406 A0A0A6YYD4 124 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 RHPN2P1A8MT19 583 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 H0YIZ8 118 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 MPIG6BO95866 241 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 GSTP1P09211 210 aaKnown RBP17.02■□□□□ 0.31
LSM12-201ENST00000293406 NPY4RP50391 375 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 FOXK1P85037 733 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 HFEQ30201 348 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 PLEKHN1Q494U1 663 aaPredicted RBP17.02■□□□□ 0.31
LSM12-201ENST00000293406 RNF144BQ7Z419 303 aa17.02■□□□□ 0.31
LSM12-201ENST00000293406 C17orf82Q86X59 251 aaPredicted RBP17.02■□□□□ 0.31
LSM12-201ENST00000293406 COMMD2Q86X83 199 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms