RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 INTS12Q96CB8 462 aaKnown RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 HES7Q9BYE0 225 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 HEXA-AS1Q9H8Q6 139 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 MED29Q9NX70 200 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 CKLFQ9UBR5 152 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 AUP1Q9Y679 476 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 A0A0A6YYH2 397 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 A0A1B0GTH9 108 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 MEGF11A6BM72 1044 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 A6NJ64 397 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 SLC22A5O76082 557 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 ACTL6AO96019 429 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 HRGP04196 525 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 PTGS2P35354 604 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 RAP2BP61225 183 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 RBMS2Q15434 407 aaKnown RBP14.85□□□□□ -0.03
CPSF4-201ENST00000292476 PCK2Q16822 640 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF626Q68DY1 528 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 DEGS2Q6QHC5 323 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 NLRC3Q7RTR2 1065 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 KRT77Q7Z794 578 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 GGNQ86UU5 652 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 MEIOBQ8N635 442 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 DNAAF1Q8NEP3 725 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 NOXO1Q8NFA2 376 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 BEST4Q8NFU0 473 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 OR51A4Q8NGJ6 313 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 GCDHQ92947 438 aaPredicted RBP14.85□□□□□ -0.03
CPSF4-201ENST00000292476 BBC3Q96PG8 261 aaPredicted RBP14.85□□□□□ -0.03
CPSF4-201ENST00000292476 MRPL13Q9BYD1 178 aaKnown RBP14.85□□□□□ -0.03
CPSF4-201ENST00000292476 OR10A4Q9H209 315 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 NKIRAS2Q9NYR9 191 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 MRPL15Q9P015 296 aaKnown RBP14.85□□□□□ -0.03
CPSF4-201ENST00000292476 KLHL13Q9P2N7 655 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 DHDHQ9UQ10 334 aa14.85□□□□□ -0.03
CPSF4-201ENST00000292476 AQP8O94778 261 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 IFNA7P01567 189 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ISG15P05161 165 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 SPARCP09486 303 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 CTLA4P16410 223 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF823P16415 610 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 DCTDP32321 178 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 MAGEA5P43359 124 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 OR3A3P47888 321 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ADAM8P78325 824 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 LINC00303Q3SY05 128 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 GLT8D1Q68CQ7 371 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 UXS1Q8NBZ7 420 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF680Q8NEM1 530 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ASB13Q8WXK3 278 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ADGRG7Q96K78 797 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 TMPRSS13Q9BYE2 586 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 CLEC4MQ9H2X3 399 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF107Q9UII5 783 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 FLVCR2Q9UPI3 526 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 R4GMQ9 66 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 CIB4A0PJX0 185 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 TUBAL3A6NHL2 446 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 FAM166BA8MTA8 275 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 SRSF10O75494 262 aaKnown RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 OR2A4O95047 310 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 GPANK1O95872 356 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ALDOBP05062 364 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 PGA4P0DJD7 388 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 PGA3P0DJD8 388 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 IGFBP3P17936 291 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ACHEP22303 614 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 EIF1AXP47813 144 aaKnown RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 POU3F4P49335 361 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 EIF2B1Q14232 305 aaKnown RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 TBR1Q16650 682 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 LGALSLQ3ZCW2 172 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ESCO2Q56NI9 601 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 C1QTNF12Q5T7M4 302 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 PCSK4Q6UW60 755 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ZADH2Q8N4Q0 377 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 OR9K2Q8NGE7 335 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 OR2T35Q8NGX2 323 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 OR10D3Q8NH80 312 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 FAM3DQ96BQ1 224 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 OR2A7Q96R45 310 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 ABHD6Q9BV23 337 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 METTL17Q9H7H0 456 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-201ENST00000292476 SCPEP1Q9HB40 452 aa14.84□□□□□ -0.03
CPSF4-201ENST00000292476 IGSF10Q6WRI0 2623 aa14.83□□□□□ -0.03
CPSF4-201ENST00000292476 CACNA1GO43497 2377 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 G3V3Q6 166 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 MELTFP08582 738 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 RPS27P42677 84 aaKnown RBP14.83□□□□□ -0.04
CPSF4-201ENST00000292476 GUCA1AP43080 201 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-201ENST00000292476 CLDN17P56750 224 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 ACTBP60709 375 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 ACTG1P63261 375 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF704Q6ZNC4 412 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-201ENST00000292476 Q6ZTK2 550 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 CDH26Q8IXH8 852 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 OR6M1Q8NGM8 313 aa14.83□□□□□ -0.04
CPSF4-201ENST00000292476 OR6N1Q8NGY5 312 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms