RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RPL13AP3Q6NVV1 102 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 RASSF6Q6ZTQ3 369 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 CELF2-AS1Q8N7Q2 184 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 OR4Q3Q8NH05 313 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 LRRC30A6NM36 301 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 ZNF823P16415 610 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 EGR1P18146 543 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 CA6P23280 308 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 MXRA7P84157 204 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 CRMP1Q14194 572 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 MRPL21Q7Z2W9 205 aaKnown RBP21.05■□□□□ 0.96
U2AF1-201ENST00000291552 C1orf87Q8N0U7 546 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 PARP8Q8N3A8 854 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 LNX2Q8N448 690 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 OR2T4Q8NH00 348 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 UPRTQ96BW1 309 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 NMNAT2Q9BZQ4 307 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 UFSP2Q9NUQ7 469 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 TBC1D23Q9NUY8 699 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 NDE1Q9NXR1 346 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 CMYA5Q8N3K9 4069 aa21.05■□□□□ 0.96
U2AF1-201ENST00000291552 CD300LBA8K4G0 201 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 DCTN3O75935 186 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 GYPBP06028 91 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 PPIAL4GP0DN37 164 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 PRTN3P24158 256 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 PITPNBP48739 271 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 PCK2Q16822 640 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 GLYATL3Q5SZD4 288 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 ZNF841Q6ZN19 808 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 DCXRQ7Z4W1 244 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 ZNF511Q8NB15 262 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 AQP11Q8NBQ7 271 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 OR8B3Q8NGG8 313 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 SPRYD4Q8WW59 207 aaPredicted RBP21.04■□□□□ 0.96
U2AF1-201ENST00000291552 RAB40AQ8WXH6 277 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 SPTSSAQ969W0 71 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 OR8B2Q96RD0 313 aa21.04■□□□□ 0.96
U2AF1-201ENST00000291552 CCNB2O95067 398 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 SOX14O95416 240 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 PTBP3O95758 552 aaKnown RBP21.03■□□□□ 0.96
U2AF1-201ENST00000291552 PLATP00750 562 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 HKR1P10072 659 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 OR8G1Q15617 311 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 LRRN1Q6UXK5 716 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 C9orf139Q6ZV77 190 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 LINC00471Q8N535 108 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 ERGIC1Q969X5 290 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 ZMYND19Q96E35 227 aaPredicted RBP21.03■□□□□ 0.96
U2AF1-201ENST00000291552 ADAT1Q9BUB4 502 aaKnown RBP21.03■□□□□ 0.96
U2AF1-201ENST00000291552 TSSK6Q9BXA6 273 aa21.03■□□□□ 0.96
U2AF1-201ENST00000291552 C22orf46C9J442 243 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 CLUP10909 449 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 SLC2A1P11166 492 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 PSMB10P40306 273 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 WDR25Q64LD2 544 aaPredicted RBP21.02■□□□□ 0.96
U2AF1-201ENST00000291552 LCN8Q6JVE9 175 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 DRAM2Q6UX65 266 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 RBMS3Q6XE24 437 aaKnown RBP21.02■□□□□ 0.96
U2AF1-201ENST00000291552 DCDC5Q6ZRR9 648 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 FITM2Q8N6M3 262 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 OR11L1Q8NGX0 322 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 PLEKHA8Q96JA3 519 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 ARMC1Q9NVT9 282 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 CTSZQ9UBR2 303 aa21.02■□□□□ 0.96
U2AF1-201ENST00000291552 TRAV40A0A0B4J280 105 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 KIR2DS1A0A191URI9 304 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 SPARCP09486 303 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 SPI1P17947 270 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 ENTPD1P49961 510 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 PRKXP51817 358 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 MS4A2Q01362 244 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 BAMBIQ13145 260 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 BTNL3Q6UXE8 466 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 SLAMF6Q96DU3 332 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 NUDT16L1Q9BRJ7 211 aaKnown RBP21.01■□□□□ 0.95
U2AF1-201ENST00000291552 COPS4Q9BT78 406 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 MAGIXQ9H6Y5 334 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 CLN8Q9UBY8 286 aa21.01■□□□□ 0.95
U2AF1-201ENST00000291552 MEGF8Q7Z7M0 2845 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 B2RBV5 119 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 PHYHO14832 338 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 IRF2P14316 349 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 SLC25A1P53007 311 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 LINC01590Q5TEZ4 76 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 NLRC3Q7RTR2 1065 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 DGCR6LQ9BY27 220 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 MS4A7Q9GZW8 240 aaPredicted RBP21■□□□□ 0.95
U2AF1-201ENST00000291552 SLC22A4Q9H015 551 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 ZMAT3Q9HA38 289 aaKnown RBP21■□□□□ 0.95
U2AF1-201ENST00000291552 RNF7Q9UBF6 113 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 PCDHGB1Q9Y5G3 927 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 U3KQV3 271 aa21■□□□□ 0.95
U2AF1-201ENST00000291552 MDFIC2A0A1B0GVS7 189 aa20.99■□□□□ 0.95
U2AF1-201ENST00000291552 GGT3PA6NGU5 568 aa20.99■□□□□ 0.95
U2AF1-201ENST00000291552 GMDSO60547 372 aa20.99■□□□□ 0.95
U2AF1-201ENST00000291552 RNASE1P07998 156 aaKnown RBP20.99■□□□□ 0.95
U2AF1-201ENST00000291552 FMO3P31513 532 aa20.99■□□□□ 0.95
U2AF1-201ENST00000291552 MICAQ29983 383 aa20.99■□□□□ 0.95
U2AF1-201ENST00000291552 OR2T5Q6IEZ7 315 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms