RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CTSFQ9UBX1 484 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 ICAM2P13598 275 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 CD38P28907 300 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 EIF1P41567 113 aaKnown RBP9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 RPL27P61353 136 aaKnown RBP9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 CDK5Q00535 292 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 PRR27Q6MZM9 219 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 TAS1R1Q7RTX1 841 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 MARCH3Q86UD3 253 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 CORO2AQ92828 525 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC35A4Q96G79 324 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 ZC3HAV1LQ96H79 300 aaKnown RBP9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 CSNK1G1Q9HCP0 422 aa9.78□□□□□ -0.84
PKNOX1-201ENST00000291547 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 NKX6-3A6NJ46 265 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 MT-ATP6P00846 226 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC25A4P12235 298 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 HOXD9P28356 352 aaPredicted RBP9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 CSF2RBP32927 897 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 RFC3P40938 356 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 TPPP2P59282 170 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 ABHD17CQ6PCB6 329 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 RTL10Q7L3V2 364 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 GLRX5Q86SX6 157 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 OR10D4PQ8NGN7 298 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 NUDT8Q8WV74 236 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 PPP1R1CQ8WVI7 109 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 GNB4Q9HAV0 340 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 PARD6AQ9NPB6 346 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 DHCR7Q9UBM7 475 aaKnown RBP9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 POMT2Q9UKY4 750 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 TBX21Q9UL17 535 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 PPP1R3CQ9UQK1 317 aa9.77□□□□□ -0.84
PKNOX1-201ENST00000291547 HRO43593 1189 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 IAPPP10997 89 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 KIR2DL3P43628 341 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 PCBP4P57723 403 aaKnown RBP9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 MPPED2Q15777 294 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 ZNF124Q15973 351 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 TAZQ16635 292 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 TEX30Q5JUR7 227 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 VRK3Q8IV63 474 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 GALNT16Q8N428 558 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 OR51E1Q8TCB6 317 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 MARCH1Q8TCQ1 289 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 EMC6Q9BV81 110 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 MAGT1Q9H0U3 335 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 XRCC2O43543 280 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 CTNSO60931 367 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 CA3P07451 260 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 SLC19A1P41440 591 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 CISD2Q8N5K1 135 aaKnown RBP9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 OR51F2Q8NH61 342 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 M1APQ8TC57 530 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 C2orf50Q96LR7 162 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 SPACA5Q96QH8 159 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 UTP23Q9BRU9 249 aaKnown RBP9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 SEMA6CQ9H3T2 930 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 GDE1Q9NZC3 331 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 MIOXQ9UGB7 285 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 AKR7A3O95154 331 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 ARRB2P32121 409 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 OR2L13Q8N349 312 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 PGBD5Q8N414 524 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 AKR1E2Q96JD6 320 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 RHOFQ9HBH0 211 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 LANCL2Q9NS86 450 aa9.77□□□□□ -0.85
PKNOX1-201ENST00000291547 FAM221AA4D161 298 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 IFITM5A6NNB3 132 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 TAPBPO15533 448 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 SLC2A10O95528 541 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 B3GALT4O96024 378 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 HOXD4P09016 255 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 GLCCI1Q86VQ1 547 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 RIMKLAQ8IXN7 391 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 RDH5Q92781 318 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 NRSN2Q9GZP1 204 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 CMC2Q9NRP2 79 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 WSB2Q9NYS7 404 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 C4orf47A7E2U8 309 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 CIDEAO60543 219 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 NDUFB7P17568 137 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 PMCHP20382 165 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 DCTDP32321 178 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 PCP4P48539 62 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 FABP5Q01469 135 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 FCRL6Q6DN72 434 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 BVESQ8NE79 360 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 OR13C5Q8NGS8 318 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 DUSP23Q9BVJ7 150 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 TINAGL1Q9GZM7 467 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 NXF2Q9GZY0 626 aaKnown RBP9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 LTB4R2Q9NPC1 389 aa9.76□□□□□ -0.85
PKNOX1-201ENST00000291547 M0R082 166 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms