RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 HRH4Q9H3N8 390 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 C1orf198Q9H425 327 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 GAREM1Q9H706 876 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 KLHL13Q9P2N7 655 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 A0A0A6YYD4 124 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 TUBAL3A6NHL2 446 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF814B7Z6K7 855 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNHIT1O43257 154 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 BCL2L11O43521 198 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 EFNA2O43921 213 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 SSX5O60225 188 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 RAD51DO75771 328 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 FARS2O95363 451 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 UBBP0CG47 229 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 UBCP0CG48 685 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 RPS27AP62979 156 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 UBA52P62987 128 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 MICBQ29980 383 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF813Q6ZN06 617 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 FAM57BQ71RH2 274 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 H1FNTQ75WM6 255 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 HSD17B13Q7Z5P4 300 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 GTPBP8Q8N3Z3 284 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 KCNRGQ8N5I3 272 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 OR51F2Q8NH61 342 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 FOXRED1Q96CU9 486 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 LMAN1LQ9HAT1 526 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 CHMP1AQ9HD42 196 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 IGHV3-15A0A0B4J1V0 119 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 IGHV1OR15-9A0A0B4J2B8 117 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 A0A0D9SG52 128 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 MASP2O00187 686 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SULT2B1O00204 365 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 AQP8O94778 261 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 TIAF1O95411 115 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SFTPBP07988 381 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 GUSBP08236 651 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 AGTR1P30556 359 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 AKR1C3P42330 323 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 ID4P47928 161 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 C14orf28Q4W4Y0 310 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 PLAC9Q5JTB6 97 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 ACOT7LQ6ZUV0 252 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 STT3BQ8TCJ2 826 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 C2CD4CQ8TF44 421 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 AQP3Q92482 292 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 ARHGAP5-AS1Q96IT6 56 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 OR5B2Q96R09 309 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 PRRT1Q99946 306 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 ZNF416Q9BWM5 594 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SLC6A15Q9H2J7 730 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 METTL8Q9H825 291 aaKnown RBP8.1□□□□□ -1.11
MSH4-201ENST00000263187 BARX1Q9HBU1 254 aaPredicted RBP8.1□□□□□ -1.11
MSH4-201ENST00000263187 GPR84Q9NQS5 396 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 LRP4O75096 1905 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 TRIOBPQ9H2D6 2365 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 MED19A0JLT2 244 aaPredicted RBP8.1□□□□□ -1.11
MSH4-201ENST00000263187 FTCDNL1E5RQL4 147 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 E9PLN8 166 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 F5H5K5 113 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 ABCD4O14678 606 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 EFSO43281 561 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
MSH4-201ENST00000263187 RAB3AP20336 220 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 GLRA1P23415 457 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SLC6A9P48067 706 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 CLDN6P56747 220 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 CLRN1P58418 232 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 COL19A1Q14993 1142 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 MPPED2Q15777 294 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SGCAQ16586 387 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 TMEM244Q5VVB8 128 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 FDX2Q6P4F2 183 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 C1QL2Q7Z5L3 287 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 SLC25A42Q86VD7 318 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.1□□□□□ -1.11
MSH4-201ENST00000263187 SLC25A32Q9H2D1 315 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 AKIRIN1Q9H9L7 192 aaPredicted RBP8.1□□□□□ -1.11
MSH4-201ENST00000263187 FSCN3Q9NQT6 498 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 PCDHB16Q9NRJ7 776 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 OR5AC2Q9NZP5 309 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 RAB22AQ9UL26 194 aa8.1□□□□□ -1.11
MSH4-201ENST00000263187 TRBV11-1A0A0K0K1C0 115 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 A0A1B0GTI1 187 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 A0A1B0GV50 99 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 F8W036 122 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 H0YIZ8 118 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 LDLRAD4O15165 306 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 OR2T1O43869 369 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 SRSF10O75494 262 aaKnown RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 ACTL6AO96019 429 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 GP1BAP07359 652 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 IFI6P09912 130 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 CALCRP30988 508 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 DHPSP49366 369 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms