RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SOX7Q9BT81 388 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SPRY3O43610 288 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 LRP3O75074 770 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 GPANK1O95872 356 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 CD3DP04234 171 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SLC17A1Q14916 467 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ALKBH3Q96Q83 286 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 TXNIPQ9H3M7 391 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 CLN3Q13286 438 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SNTB1Q13884 538 aaKnown RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 PDCD1Q15116 288 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 HLA-BQ31612 363 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 KIRREL2Q6UWL6 708 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 CADM3Q8N126 398 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 MAFAQ8NHW3 353 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SARAFQ96BY9 339 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 FAM173AQ9BQD7 235 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 PLEKHB1Q9UF11 243 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 FBXO4Q9UKT5 387 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ZDHHC11BP0C7U3 371 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 FKBP2P26885 142 aaKnown RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 CLEC12BQ2HXU8 276 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ELFN2Q5R3F8 820 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 FAM122CQ6P4D5 195 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SLC25A26Q70HW3 274 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 NLRC3Q7RTR2 1065 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 PTOV1Q86YD1 416 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 OR10G3Q8NGC4 313 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ST8SIA1Q92185 356 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 FBXW5Q969U6 566 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF416Q9BWM5 594 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 JAM3Q9BX67 310 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 NKX6-2Q9C056 277 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SPACA1Q9HBV2 294 aa10.94□□□□□ -0.66
COL8A1-201ENST00000261037 SEC14L6B5MCN3 397 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 XRCC2O43543 280 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR2C1O95371 312 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 FABP1P07148 127 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 GUCA2AQ02747 115 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 SLC25A35Q3KQZ1 300 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 TMED6Q8WW62 240 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 PSENENQ9NZ42 101 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 MEX3AA1L020 520 aaKnown RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 ADRA2CP18825 462 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 SKA3Q8IX90 412 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 NOXO1Q8NFA2 376 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR2AK2Q8NG84 335 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 TEX101Q9BY14 249 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 FBXO8Q9NRD0 319 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 A0A0A6YYD5 115 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 HYAL3O43820 417 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 GIPP09681 153 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 CTXN2P0C2S0 81 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 B4GALNT1Q00973 533 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 H3F3CQ6NXT2 135 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 RPUSD4Q96CM3 377 aaKnown RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 MRGPRX4Q96LA9 322 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 PLA2G2FQ9BZM2 168 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 MYO18AQ92614 2054 aaKnown RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR5H14A6NHG9 310 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 UMAD1C9J7I0 102 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 KLK8O60259 260 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 ADH4P08319 380 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 KIAA0141Q14154 515 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 CDH26Q8IXH8 852 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 RIMKLAQ8IXN7 391 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR10Z1Q8NGY1 313 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 CNRIP1Q96F85 164 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 NUDT9Q9BW91 350 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 PDE4DIPQ5VU43 2346 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 CHEK1O14757 476 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 FAHP16930 419 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 BTG1P62324 171 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 RELL2Q8NC24 303 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR2A1Q8NGT9 310 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR5B3Q8NH48 314 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 UBALD1Q8TB05 177 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 KTI12Q96EK9 354 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 OR2A14Q96R47 310 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 ONECUT1Q9UBC0 465 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 ST3GAL6Q9Y274 331 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 RCL1Q9Y2P8 373 aaKnown RBP10.93□□□□□ -0.66
COL8A1-201ENST00000261037 THSD7AQ9UPZ6 1657 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
COL8A1-201ENST00000261037 SOX15O60248 233 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 OR7C2O60412 319 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 MT-ND4LP03901 98 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 PIGPP57054 158 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ZNF90Q03938 601 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 FZD2Q14332 565 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 GFRALQ6UXV0 394 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 ST8SIA4Q92187 359 aa10.92□□□□□ -0.66
COL8A1-201ENST00000261037 LIN7CQ9NUP9 197 aaKnown RBP10.92□□□□□ -0.66
COL8A1-201ENST00000261037 POMT2Q9UKY4 750 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms