RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ALKAL2Q6UX46 152 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 PPP1R32Q7Z5V6 425 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 OR10S1Q8NGN2 331 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ZC4H2Q9NQZ6 224 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 CSPG4Q6UVK1 2322 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 MED12LQ86YW9 2145 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 FTCDNL1E5RQL4 147 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 NUPL2O15504 423 aaKnown RBP8.04□□□□□ -1.12
CKAP2-201ENST00000258607 DXOO77932 396 aaKnown RBP8.04□□□□□ -1.12
CKAP2-201ENST00000258607 SPDEFO95238 335 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 MT-ATP6P00846 226 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 TTRP02766 147 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 MAPK3P27361 379 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-201ENST00000258607 SCRN3Q0VDG4 424 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 C2orf68Q2NKX9 166 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 SNAI3Q3KNW1 292 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ANKRD16Q6P6B7 361 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 TRAPPC6BQ86SZ2 158 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 CLEC1AQ8NC01 280 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 OR51T1Q8NGJ9 327 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 HAVCR2Q8TDQ0 301 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 TRIM63Q969Q1 353 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ELMOD3Q96FG2 381 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 STEAP1Q9UHE8 339 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 FOXJ3Q9UPW0 622 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 MOKQ9UQ07 419 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 CSMD1Q96PZ7 3565 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 UBE2QL1A1L167 161 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 C5orf51A6NDU8 294 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 TRAF3IP2O43734 574 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ABHD16AO95870 558 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 SCGB1D2O95969 90 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 MT-CO3P00414 261 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 RRASP10301 218 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 PTGDSP41222 190 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ASPHD2Q6ICH7 369 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
CKAP2-201ENST00000258607 SLC16A14Q7RTX9 510 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 KMT5CQ86Y97 462 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 NAXDQ8IW45 347 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 TUSC5Q8IXB3 177 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 COQ8AQ8NI60 647 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF519Q8TB69 540 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 ACOT12Q8WYK0 555 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 HGDQ93099 445 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 UCK1Q9HA47 277 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 UPB1Q9UBR1 384 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 SLC23A1Q9UHI7 598 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 A3GALT2U3KPV4 340 aa8.04□□□□□ -1.12
CKAP2-201ENST00000258607 CIB4A0PJX0 185 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 CTAG2O75638 210 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 YES1P07947 543 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF35P13682 527 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF32P17041 273 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 GNG2P59768 71 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 OR1C1Q15619 314 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 SLC35D3Q5M8T2 416 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 CLEC9AQ6UXN8 241 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 PXKQ7Z7A4 578 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF584Q8IVC4 421 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 BPIFB2Q8N4F0 458 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 MFSD8Q8NHS3 518 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 NARS2Q96I59 477 aaKnown RBP8.03□□□□□ -1.12
CKAP2-201ENST00000258607 MED18Q9BUE0 208 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 PARP12Q9H0J9 701 aaKnown RBP8.03□□□□□ -1.12
CKAP2-201ENST00000258607 HAO2Q9NYQ3 351 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 GLTPQ9NZD2 209 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 GGT3PA6NGU5 568 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 HMX3A6NHT5 357 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 GPRIN2O60269 458 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 PSMB1P20618 241 aaKnown RBP8.03□□□□□ -1.12
CKAP2-201ENST00000258607 HRH1P35367 487 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 PITPNAQ00169 270 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 SORDQ00796 357 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 C6orf201Q7Z4U5 140 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 TPRA1Q86W33 373 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF441Q8N8Z8 693 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 NOXO1Q8NFA2 376 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 OR5T2Q8NGG2 359 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 WDFY2Q96P53 400 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 B3GALT5Q9Y2C3 310 aa8.03□□□□□ -1.12
CKAP2-201ENST00000258607 PCDHGA9Q9Y5G4 932 aaKnown RBP8.03□□□□□ -1.12
CKAP2-201ENST00000258607 ANKHD1Q8IWZ3 2542 aaKnown RBP8.03□□□□□ -1.12
CKAP2-201ENST00000258607 MED19A0JLT2 244 aaPredicted RBP8.02□□□□□ -1.12
CKAP2-201ENST00000258607 GPR171O14626 319 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 ZIC3O60481 467 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 IGHV3-13P01766 116 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 IGHV3-7P01780 117 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 MTCP1P56278 107 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 IL11RAQ14626 422 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 DEFB109BQ30KR1 87 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF100Q8IYN0 542 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 MINDY2Q8NBR6 621 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 NUBPLQ8TB37 319 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 RNF128Q8TEB7 428 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms