RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DLX2Q07687 328 aaPredicted RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RAB32Q13637 225 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 PDCD1Q15116 288 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 Q6ZS52 159 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 OR5AP2Q8NGF4 316 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 OR5H2Q8NGV7 314 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RAB3CQ96E17 227 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RRNAD1Q96FB5 475 aaKnown RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 KLHDC7BQ96G42 594 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 SULT4A1Q9BR01 284 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 DUSP15Q9H1R2 295 aaPredicted RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 PCNX3Q9H6A9 2034 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 PDE7BQ9NP56 450 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 KLRF1Q9NZS2 232 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 B3GALT1Q9Y5Z6 326 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 SULT2B1O00204 365 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 ADAM10O14672 748 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 TNFSF14O43557 240 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 NXPH3O95157 252 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 JMJD7P0C870 316 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RAB13P51153 203 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 FAM57BQ71RH2 274 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF440Q8IYI8 595 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 OR51T1Q8NGJ9 327 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 RNF141Q8WVD5 230 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 ZC3H10Q96K80 434 aaKnown RBP10.69□□□□□ -0.7
USHBP1-201ENST00000252597 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
USHBP1-201ENST00000252597 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 ADCYAP1P18509 176 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 OR3A4PP47883 348 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 DHODHQ02127 395 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 RBMS3Q6XE24 437 aaKnown RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 OR2AJ1Q8NGZ0 328 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 RHOFQ9HBH0 211 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 PRMT8Q9NR22 394 aaPredicted RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 SUSD2Q9UGT4 822 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 OR6C65A6NJZ3 312 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 RHPN2P1A8MT19 583 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 XRCC2O43543 280 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 WDPCPO95876 746 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 SPINK2P20155 84 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 PTPMT1Q8WUK0 201 aaPredicted RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 PIGTQ969N2 578 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 JSRP1Q96MG2 331 aaPredicted RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 BIN3Q9NQY0 253 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 SLC2A4RGQ9NR83 387 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 ASH2LQ9UBL3 628 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 MRPS28Q9Y2Q9 187 aaKnown RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 CNOT1A5YKK6 2376 aaKnown RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 NPIPB9F8W1W9 429 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 ZNHIT1O43257 154 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 FOXK1P85037 733 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 MEF2DQ14814 521 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 SHEQ5VZ18 495 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 MOB3CQ70IA8 216 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 ZSCAN4Q8NAM6 433 aaPredicted RBP10.68□□□□□ -0.7
USHBP1-201ENST00000252597 ARHGAP5-AS1Q96IT6 56 aa10.68□□□□□ -0.7
USHBP1-201ENST00000252597 FANCMQ8IYD8 2048 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 C2orf16Q68DN1 1984 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 TRBV23-1A0A0A0MS06 115 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 RAB27BO00194 218 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 PHYHO14832 338 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 SNAPINO95295 136 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 DIRAS3O95661 229 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 HFEQ30201 348 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 IGSF11Q5DX21 431 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 AVPI1Q5T686 147 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 LRRC18Q8N456 261 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 SECTM1Q8WVN6 248 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 SLAMF6Q96DU3 332 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 LIN37Q96GY3 246 aaPredicted RBP10.67□□□□□ -0.7
USHBP1-201ENST00000252597 ESRP2Q9H6T0 727 aaKnown RBP10.67□□□□□ -0.7
USHBP1-201ENST00000252597 AMDHD2Q9Y303 409 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 MEGF11A6BM72 1044 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 G3V3Y1 287 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 C1QL1O75973 258 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 ARG1P05089 322 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 CRHP06850 196 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 MUC1P15941 1255 aaPredicted RBP10.67□□□□□ -0.7
USHBP1-201ENST00000252597 OPRM1P35372 400 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 GPR85P60893 370 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 IAH1Q2TAA2 248 aaPredicted RBP10.67□□□□□ -0.7
USHBP1-201ENST00000252597 CHRFAM7AQ494W8 412 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 DRAM2Q6UX65 266 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 C20orf196Q8IYI0 205 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 LRRC75AQ8NAA5 344 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 LRFN5Q96NI6 719 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 WDR77Q9BQA1 342 aaPredicted RBP10.67□□□□□ -0.7
USHBP1-201ENST00000252597 CUTCQ9NTM9 273 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 SLC5A6Q9Y289 635 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 R4GMQ9 66 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 MYO7BQ6PIF6 2116 aa10.67□□□□□ -0.7
USHBP1-201ENST00000252597 KIAA1549LQ6ZVL6 1849 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 A6NCN8 305 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 RER1O15258 196 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 SFTA3P0C7M3 94 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms