RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 DEGS2Q6QHC5 323 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 OR5D18Q8NGL1 313 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 OR5D14Q8NGL3 314 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 OR6K3Q8NGY3 331 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 NPRL2Q8WTW4 380 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ZC3H10Q96K80 434 aaKnown RBP22.64■■□□□ 1.21
RAB40C-201ENST00000248139 SLCO5A1Q9H2Y9 848 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 IFT46Q9NQC8 304 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 MYOTQ9UBF9 498 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ZNF208O43345 1280 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 MPIG6BO95866 241 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ZP3P21754 424 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ZNF121P58317 390 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-201ENST00000248139 IL13RA1P78552 427 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 PDZD9Q8IXQ8 264 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 TDHQ8IZJ6 230 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 ST8SIA2Q92186 375 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 CRB3Q9BUF7 120 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 SRPK3Q9UPE1 567 aa22.64■■□□□ 1.21
RAB40C-201ENST00000248139 TMEM176BQ3YBM2 270 aaPredicted RBP22.63■■□□□ 1.21
RAB40C-201ENST00000248139 TMEM71Q6P5X7 295 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 GLIPR1L1Q6UWM5 242 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 OR8B12Q8NGG6 310 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 NUBPLQ8TB37 319 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 GPR84Q9NQS5 396 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 KLHL13Q9P2N7 655 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 PGA4P0DJD7 388 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 PGA3P0DJD8 388 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 ZNF20P17024 532 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 ZBTB25P24278 435 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 CLVS2Q5SYC1 327 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 SLC51BQ86UW2 128 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 NAXDQ8IW45 347 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 CARFQ8N187 725 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 MARCH1Q8TCQ1 289 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 SDHAF3Q9NRP4 125 aa22.63■■□□□ 1.21
RAB40C-201ENST00000248139 PI3P19957 117 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 CCL7P80098 99 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 FOXRED1Q96CU9 486 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-201ENST00000248139 TMEM41AQ96HV5 264 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 VRK1Q99986 396 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-201ENST00000248139 IGLV3-12A0A075B6K2 115 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 C9orf170A2RU37 121 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 ATF4P18848 351 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-201ENST00000248139 RAB6AP20340 208 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 DCDP81605 110 aaKnown RBP22.62■■□□□ 1.21
RAB40C-201ENST00000248139 CPEB2Q7Z5Q1 589 aaKnown RBP22.62■■□□□ 1.21
RAB40C-201ENST00000248139 OR2AJ1Q8NGZ0 328 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 WIF1Q9Y5W5 379 aa22.62■■□□□ 1.21
RAB40C-201ENST00000248139 TRAF3IP2O43734 574 aaPredicted RBP22.61■■□□□ 1.21
RAB40C-201ENST00000248139 PRKACBP22694 351 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 CALCRP30988 508 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 P2RY4P51582 365 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 FAM57BQ71RH2 274 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 SLC25A42Q86VD7 318 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 KMT5CQ86Y97 462 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 UBE2ZQ9H832 354 aaPredicted RBP22.61■■□□□ 1.21
RAB40C-201ENST00000248139 A0A0A6YYH2 397 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 C13orf42A0A1B0GVH6 325 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 A6NJ64 397 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 G3V3Y1 287 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 TPD52L2O43399 206 aaKnown RBP22.61■■□□□ 1.21
RAB40C-201ENST00000248139 QDPRP09417 244 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 ZNF17P17021 662 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 PLAC9Q5JTB6 97 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 ELP2Q6IA86 826 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 LYG2Q86SG7 212 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 BVESQ8NE79 360 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 NOXO1Q8NFA2 376 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 OR10R2Q8NGX6 335 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 DNASE2BQ8WZ79 361 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 SPSB2Q99619 263 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 PRRT1Q99946 306 aa22.61■■□□□ 1.21
RAB40C-201ENST00000248139 A8MXK9 166 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 MASP2O00187 686 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 THEM4Q5T1C6 240 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 RAB12Q6IQ22 244 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 C11orf87Q6NUJ2 197 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 JMJD6Q6NYC1 403 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-201ENST00000248139 RABEPKQ7Z6M1 372 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 OR5AS1Q8N127 324 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 OR6S1Q8NH40 331 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 LIN37Q96GY3 246 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-201ENST00000248139 ZNF471Q9BX82 626 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-201ENST00000248139 LPAR5Q9H1C0 372 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 SESN1Q9Y6P5 492 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 IGHV3-15A0A0B4J1V0 119 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 IGHG1P01857 330 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 MEF2DQ14814 521 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 ATRAIDQ6UW56 229 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 HDDC2Q7Z4H3 204 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 DTX1Q86Y01 620 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 MAFIPQ8WZ33 124 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 PTX4Q96A99 478 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 COMMD9Q9P000 198 aa22.6■■□□□ 1.21
RAB40C-201ENST00000248139 TNRC18O15417 2968 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-201ENST00000248139 RNF222A6NCQ9 220 aa22.59■■□□□ 1.21
RAB40C-201ENST00000248139 BPNT1O95861 308 aa22.59■■□□□ 1.21
RAB40C-201ENST00000248139 HPP00738 406 aa22.59■■□□□ 1.21
RAB40C-201ENST00000248139 IFNA6P05013 189 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms