RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 YIF1AO95070 293 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 HOXA9P31269 272 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 TMEM201Q5SNT2 666 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 ABHD6Q9BV23 337 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 MCRIP1C9JLW8 97 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 ADAP1O75689 374 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 NXPH2O95156 264 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 VWA2Q5GFL6 755 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 HACD4Q5VWC8 232 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 ACOT7LQ6ZUV0 252 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 PPP1R14DQ9NXH3 145 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 ETV7Q9Y603 341 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 DNAJC25-GNG10A0A024R161 153 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 TMEM129A0AVI4 362 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 GPX2P18283 190 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 GRB2P62993 217 aaKnown RBP6.82□□□□□ -1.32
RIF1-201ENST00000243326 FAM209BQ5JX69 171 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 OLIG1Q8TAK6 271 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 OR1E3Q8WZA6 343 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 TMEM38AQ9H6F2 299 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 CXorf65A6NEN9 183 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 PIAS2O75928 621 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 CDK5R1Q15078 307 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 TCTE3Q8IZS6 198 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 DOK5Q9P104 306 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 GPR137BO60478 399 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 OR8U8P0C7N1 319 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 GCH1P30793 250 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 CSNK1EP49674 416 aaKnown RBP6.82□□□□□ -1.32
RIF1-201ENST00000243326 SLC6A18Q96N87 628 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 PMS2P11Q13670 270 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 ABHD17CQ6PCB6 329 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 KCNG3Q8TAE7 436 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 MS4A6EQ96DS6 147 aa6.82□□□□□ -1.32
RIF1-201ENST00000243326 CDRT15L2A8MXV6 281 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 SLC48A1Q6P1K1 146 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 RNASEKQ6P5S7 137 aaKnown RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 KIRREL2Q6UWL6 708 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 BCL7CQ8WUZ0 217 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 GPRIN2O60269 458 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 WDR1O75083 606 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MEOX2P50222 304 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 C1orf140Q5VVS0 124 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 CXorf67Q86X51 503 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 SCMH1Q96GD3 660 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MAST2Q6P0Q8 1798 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 OR2J3O76001 311 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 CALCRP30988 508 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 ADGRL4Q9HBW9 690 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 RCC1P18754 421 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 OR8B8Q15620 311 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MANEAQ5SRI9 462 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 ERASQ7Z444 233 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 OR10V1Q8NGI7 309 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 SLAMF6Q96DU3 332 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 LPAR4Q99677 370 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 FZR1Q9UM11 496 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 FTCDNL1E5RQL4 147 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 CD14P08571 375 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 TMIGD3P0DMS9 266 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 SLC25A4P12235 298 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 ELAVL1Q15717 326 aaKnown RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 C17orf47Q8NEP4 570 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 TMEM204Q9BSN7 226 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MALRD1Q5VYJ5 2156 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 DEGS1O15121 323 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 FAHP16930 419 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MSMO1Q15800 293 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 RFLNBQ8N5W9 214 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 SDF2Q99470 211 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 HPXP02790 462 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 EPXP11678 715 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 HMGN3Q15651 99 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 GSG1Q2KHT4 349 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 HTR3DQ70Z44 454 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 C20orf141Q9NUB4 165 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 SCN7AQ01118 1682 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 DDAH2O95865 285 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 TIMP1P01033 207 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 C16orf47Q6ZP98 133 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 TCTN2Q96GX1 697 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 ZDHHC5Q9C0B5 715 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 Q9Y3F1 56 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 A0A1W2PPE2 198 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 IFITM5A6NNB3 132 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 PPP5D1E7EU14 171 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 G3V3Q6 166 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 NOVP48745 357 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 RAB30Q15771 203 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 PLXDC1Q8IUK5 500 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 SKA3Q8IX90 412 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 DUSP18Q8NEJ0 188 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 TBC1D29Q9UFV1 150 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms