RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SP5Q6BEB4 398 aaPredicted RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 RDH10Q8IZV5 341 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 BOLLQ8N9W6 283 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 SLC25A40Q8TBP6 338 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 NABP1Q96AH0 204 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 NOX3Q9HBY0 568 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 EXPH5Q8NEV8 1989 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 FAM230AA0A1W2PPH8 454 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 PLATP00750 562 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 CSTBP04080 98 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 MXD1Q05195 221 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 ALKBH6Q3KRA9 238 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 SGCDQ92629 289 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 FGGYQ96C11 551 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 AMELYQ99218 206 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 TMEM100Q9NV29 134 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 TAAR3PQ9P1P4 343 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 PAIP2BQ9ULR5 123 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 RGS5O15539 181 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 TGFBR2P37173 567 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 CDK5R1Q15078 307 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 Q499Y3 187 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 FIP1L1Q6UN15 594 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 SSX6Q7RTT6 188 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 EGFL6Q8IUX8 553 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 TRMT10AQ8TBZ6 339 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 TMEM106AQ96A25 262 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR2J1Q9GZK6 312 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 PCDHB16Q9NRJ7 776 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 MEGF11A6BM72 1044 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 MAS1P04201 325 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 SCG5P05408 212 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 TUBG1P23258 451 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 DCTDP32321 178 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 PEG10Q86TG7 708 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF101Q8IZC7 436 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 FBXW5Q969U6 566 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 SLC22A4Q9H015 551 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 TUBG2Q9NRH3 451 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 NUFIP1Q9UHK0 495 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 STUB1Q9UNE7 303 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 STARD10Q9Y365 291 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 CELA3BP08861 270 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 MMP16P51512 607 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF133P52736 654 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 BDH1Q02338 343 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 ROM1Q03395 351 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 WDR38Q5JTN6 314 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 AGAP6Q5VW22 663 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 FGFBP3Q8TAT2 258 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 ST7LQ8TDW4 575 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 SMIM19Q96E16 107 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 C14orf119Q9NWQ9 140 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 CRIM1Q9NZV1 1036 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 PRKACBP22694 351 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 TGM4P49221 684 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 ATP1B3P54709 279 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 MRPS15P82914 257 aaKnown RBP9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 SERPINA12Q8IW75 414 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR8B12Q8NGG6 310 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR11L1Q8NGX0 322 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 BOD1Q96IK1 185 aa9.66□□□□□ -0.86
TNFAIP3-201ENST00000237289 SPEGQ15772 3267 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 IGHV2OR16-5A0A0B4J2B6 119 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 A6NIN4 97 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 M0R233 179 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 SYNGR3O43761 229 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 PLA2G2AP14555 144 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 S100A5P33763 92 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 CCR9P51686 369 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 EFNB1P98172 346 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 WDR31Q8NA23 367 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR56B2PQ8NGI1 322 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR13C9Q8NGT0 318 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR13G1Q8NGZ3 307 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 TMEM171Q8WVE6 324 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 RNF170Q96K19 258 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 IGHV1-18A0A0C4DH31 117 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 SPRY3O43610 288 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 ACSM4P0C7M7 580 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 C22orf42Q6IC83 251 aa9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 PHF3Q92576 2039 aaKnown RBP9.65□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 TMEM225BP0DP42 221 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 GLRXP35754 106 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 GMFBP60983 142 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 GPR50Q13585 617 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 ELMOD2Q8IZ81 293 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 NEK7Q8TDX7 302 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 TRMT61AQ96FX7 289 aaKnown RBP9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 RTL8AQ9BWD3 113 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 CYSLTR2Q9NS75 346 aa9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 KLF2Q9Y5W3 355 aaPredicted RBP9.65□□□□□ -0.87
TNFAIP3-201ENST00000237289 NRASP01111 189 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 GABRA5P31644 462 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 GUSBP1Q15486 140 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 FOXL2NBQ6ZUU3 175 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 WDFY1Q8IWB7 410 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 RFLNBQ8N5W9 214 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 FBLIM1Q8WUP2 373 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms