RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CLN6Q9NWW5 311 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 NKIRAS2Q9NYR9 191 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 STARD10Q9Y365 291 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 NOP16Q9Y3C1 178 aaKnown RBP9.65□□□□□ -0.86
SF3B6-201ENST00000233468 PCDHGB1Q9Y5G3 927 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 CHD3Q12873 2000 aaKnown RBP9.65□□□□□ -0.87
SF3B6-201ENST00000233468 MXRA5Q9NR99 2828 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 CADP27708 2225 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 LOC390937A0A1W2PQ73 354 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 CCDC182A6NF36 153 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 ACOD1A6NK06 481 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 CASQ2O14958 399 aaPredicted RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 TPD52L2O43399 206 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 XRCC2O43543 280 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 ANXA2P07355 339 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 MRPL3P09001 348 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 KITLGP21583 273 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 DCTDP32321 178 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 OPRL1P41146 370 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 CX3CR1P49238 355 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF81P51508 661 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 PRKXP51817 358 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 MRPS11P82912 194 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 PSG7Q13046 419 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 SNCBQ16143 134 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 OCLNQ16625 522 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 LRRC36Q1X8D7 754 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 PGAP1Q75T13 922 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 SPATC1Q76KD6 591 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF771Q7L3S4 317 aaPredicted RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 MRPL21Q7Z2W9 205 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 SETD9Q8NE22 299 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 OR10S1Q8NGN2 331 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 SPRYD4Q8WW59 207 aaPredicted RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 FAM168AQ92567 244 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 ITFG2Q969R8 447 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 MRPL48Q96GC5 212 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 SORCS2Q96PQ0 1159 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 MBOAT4Q96T53 435 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 OR10A2Q9H208 303 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 RGCCQ9H4X1 137 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 FAM118AQ9NWS6 357 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 PTTG3PQ9NZH4 202 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF391Q9UJN7 358 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 PURGQ9UJV8 347 aaKnown RBP9.64□□□□□ -0.87
SF3B6-201ENST00000233468 CR1P17927 2039 aa9.64□□□□□ -0.87
SF3B6-201ENST00000233468 M0R129 80 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 SBK2P0C263 348 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 OR2T7P0C7T2 308 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 NAT2P11245 290 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 DAOP14920 347 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 SLC25A16P16260 332 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 MPV17P39210 176 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 DDOSTP39656 456 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 MTNR1AP48039 350 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 RIDAP52758 137 aaKnown RBP9.63□□□□□ -0.87
SF3B6-201ENST00000233468 ACTC1P68032 377 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 ACTA1P68133 377 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 ROM1Q03395 351 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 EGR3Q06889 387 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 IL18R1Q13478 541 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 MAD2L1BPQ15013 274 aaPredicted RBP9.63□□□□□ -0.87
SF3B6-201ENST00000233468 TIGD6Q17RP2 521 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 MSMPQ1L6U9 139 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 RSPO1Q2MKA7 263 aaPredicted RBP9.63□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF829Q3KNS6 432 aaPredicted RBP9.63□□□□□ -0.87
SF3B6-201ENST00000233468 OGFRL1Q5TC84 451 aaPredicted RBP9.63□□□□□ -0.87
SF3B6-201ENST00000233468 LPCAT4Q643R3 524 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 SLC35F2Q8IXU6 374 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF679Q8IYX0 411 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 FTMTQ8N4E7 242 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 DHRSXQ8N5I4 330 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 OR51G2Q8NGK0 314 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 OR13G1Q8NGZ3 307 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 OR2T27Q8NH04 317 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 UBASH3BQ8TF42 649 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 RDH5Q92781 318 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 PIMREGQ9BSJ6 248 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 SLC22A4Q9H015 551 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 TPK1Q9H3S4 243 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 ADGRL4Q9HBW9 690 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 DNAJC27Q9NZQ0 273 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 MYEF2Q9P2K5 600 aaKnown RBP9.63□□□□□ -0.87
SF3B6-201ENST00000233468 IKZF2Q9UKS7 526 aa9.63□□□□□ -0.87
SF3B6-201ENST00000233468 GGT3PA6NGU5 568 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 E9PQ18 207 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 TBX1O43435 398 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 NDUFS7O75251 213 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 KRT8P05787 483 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 ADH4P08319 380 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 TNFRSF1AP19438 455 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 PEX2P28328 305 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 MMP15P51511 669 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 CXCR4P61073 352 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 MZT1Q08AG7 82 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 GK2Q14410 553 aaPredicted RBP9.62□□□□□ -0.87
SF3B6-201ENST00000233468 CARTPTQ16568 116 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 ALKBH6Q3KRA9 238 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF322Q6U7Q0 402 aaPredicted RBP9.62□□□□□ -0.87
SF3B6-201ENST00000233468 USP51Q70EK9 711 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms