RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 OR9A4Q8NGU2 314 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 ASB17Q8WXJ9 295 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 ASCC3Q8N3C0 2202 aaKnown RBP12.59□□□□□ -0.39
SF1-201ENST00000227503 HOXB5P09067 269 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 HNRNPA2B1P22626 353 aaKnown RBP12.59□□□□□ -0.39
SF1-201ENST00000227503 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
SF1-201ENST00000227503 MEF2DQ14814 521 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 C21orf62-AS1Q17RA5 79 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 TMEM31Q5JXX7 168 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 BTNL8Q6UX41 500 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 PNLDC1Q8NA58 520 aaKnown RBP12.59□□□□□ -0.39
SF1-201ENST00000227503 RCBTB1Q8NDN9 531 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 EIF5A2Q9GZV4 153 aaKnown RBP12.59□□□□□ -0.39
SF1-201ENST00000227503 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 FAM60AQ9NP50 221 aa12.59□□□□□ -0.39
SF1-201ENST00000227503 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 A0A087WUJ7 227 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 LOC101059948A0A1B0GTJ6 334 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 ZNF727A8MUV8 499 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 ZNF432O94892 652 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 ALOX5APP20292 161 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 GAMTQ14353 236 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 ZNHIT3Q15649 155 aaPredicted RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 DMRTC1Q5HYR2 192 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 RNF128Q8TEB7 428 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 SLC25A44Q96H78 314 aaPredicted RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 SPACA7Q96KW9 195 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 PRRT1Q99946 306 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 DHDHQ9UQ10 334 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 URGCP-MRPS24S4R325 110 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 F5P12259 2224 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 ARPC3O15145 178 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 SFTPBP07988 381 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 BTF3P20290 206 aaKnown RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 TACR3P29371 465 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 DVL1P1P54792 670 aaPredicted RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 NAAAQ02083 359 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 SURF2Q15527 256 aaPredicted RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 MIDNQ504T8 468 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 MESTQ5EB52 335 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 CDCP2Q5VXM1 449 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 PTCRAQ6ISU1 281 aaPredicted RBP12.58□□□□□ -0.4
SF1-201ENST00000227503 FAM166AQ6J272 317 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 SPNS3Q6ZMD2 512 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 INTS14Q96SY0 518 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 NUDT9Q9BW91 350 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 LRIT1Q9P2V4 623 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 FBXO7Q9Y3I1 522 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 WIF1Q9Y5W5 379 aa12.58□□□□□ -0.4
SF1-201ENST00000227503 C11orf98E9PRG8 122 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 LINC01565O15544 149 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
SF1-201ENST00000227503 HLA-GP17693 338 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 CEBPGP53567 150 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 ZNF239Q16600 458 aaKnown RBP12.57□□□□□ -0.4
SF1-201ENST00000227503 ZNF343Q6P1L6 599 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 RNF144BQ7Z419 303 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 ZNF524Q96C55 264 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 MRGPRX1Q96LB2 322 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
SF1-201ENST00000227503 METTL8Q9H825 291 aaKnown RBP12.57□□□□□ -0.4
SF1-201ENST00000227503 PDE7BQ9NP56 450 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 MYOZ1Q9NP98 299 aaPredicted RBP12.57□□□□□ -0.4
SF1-201ENST00000227503 SLC2A8Q9NY64 477 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 SPAG17Q6Q759 2223 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 FAM221BA6H8Z2 402 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 NUDT19A8MXV4 375 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 IFNA6P05013 189 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 SPARCP09486 303 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
SF1-201ENST00000227503 ISXQ2M1V0 245 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 DEFB110Q30KQ9 67 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 ALG10Q5BKT4 473 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 TAF8Q7Z7C8 310 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 EXD3Q8N9H8 876 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 SPACA5Q96QH8 159 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 CCDC3Q9BQI4 270 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 ZDHHC8Q9ULC8 765 aa12.57□□□□□ -0.4
SF1-201ENST00000227503 PUS1Q9Y606 427 aaKnown RBP eCLIP12.57□□□□□ -0.4
SF1-201ENST00000227503 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 C17orf51A8MQB3 221 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 UMAD1C9J7I0 102 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
SF1-201ENST00000227503 FBXO46Q6PJ61 603 aaPredicted RBP12.56□□□□□ -0.4
SF1-201ENST00000227503 ADGRE4PQ86SQ3 457 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 ZDHHC12Q96GR4 267 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 DBX1A6NMT0 343 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 CELA2BP08218 269 aaPredicted RBP12.56□□□□□ -0.4
SF1-201ENST00000227503 CT45A8P0DMV1 189 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 CT45A9P0DMV2 189 aa12.56□□□□□ -0.4
SF1-201ENST00000227503 ARRB1P49407 418 aaPredicted RBP12.56□□□□□ -0.4
SF1-201ENST00000227503 CT45A2Q5DJT8 189 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms