RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 OR52B4Q8NGK2 314 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 THEM4Q5T1C6 240 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 DOK4Q8TEW6 326 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 CRISP2P16562 243 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 EXT1Q16394 746 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 LIPHQ8WWY8 451 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 ZC3HAV1LQ96H79 300 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 PHLPP1O60346 1717 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 SCN3AQ9NY46 2000 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 SELEP16581 610 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 DHRS13Q6UX07 377 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 OR51H1Q8NH63 302 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 ENSAO43768 121 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 MRPL33O75394 65 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 ADGRG7Q96K78 797 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 BOKQ9UMX3 212 aaPredicted RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 MANEAQ5SRI9 462 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 TSEN54Q7Z6J9 526 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 AUNIPQ9H7T9 357 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 PRDM7Q9NQW5 492 aa12.5□□□□□ -0.41
SIPA1L3-201ENST00000222345 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 DUS4LO95620 317 aaKnown RBP12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 GCGP01275 180 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 MLF1P58340 268 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 PAX5Q02548 391 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 ERGIC1Q969X5 290 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 STARD4Q96DR4 205 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 GLIPR2Q9H4G4 154 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 RCL1Q9Y2P8 373 aaKnown RBP12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 MFNGO00587 321 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 ARPC3O15145 178 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 TIMM8AO60220 97 aaPredicted RBP12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 ORM1P02763 201 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 RPL27P61353 136 aaKnown RBP12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 SOX15O60248 233 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 HLA-DRB3P79483 266 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 AWAT1Q58HT5 328 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 CA5BP1Q8WTZ4 195 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 TSACCQ96A04 125 aaPredicted RBP12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 WDR1O75083 606 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 OR4A47Q6IF82 309 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 NXPE3Q969Y0 559 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 ST6GAL2Q96JF0 529 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 SNX22Q96L94 193 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 RAB40CQ96S21 281 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 PRRX2Q99811 253 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 WDR83Q9BRX9 315 aaKnown RBP12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 DIO1P49895 249 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 SULT1A1P50225 295 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 NSUN5P2Q63ZY6 315 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 BPIFA4PQ86YQ2 179 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 OR52E1Q8NGJ3 308 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 NKX6-3A6NJ46 265 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 NID1P14543 1247 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 PSMB2P49721 201 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 RNF175Q8N4F7 328 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 PFN4Q8NHR9 129 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 POLDIP2Q9Y2S7 368 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
SIPA1L3-201ENST00000222345 IL13RA2Q14627 380 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 GPR32P1Q8NGA4 272 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 TEX37Q96LM6 180 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 HAPLN2Q9GZV7 340 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 BANF2Q9H503 90 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 LRIT1Q9P2V4 623 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 PISDQ9UG56 409 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 LIMK1P53667 647 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 XAF1Q6GPH4 301 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 C19orf43Q9BQ61 176 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 LSM2Q9Y333 95 aaKnown RBP12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 ABCD4O14678 606 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 ZNF737O75373 536 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 OTX2P32243 289 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 CLDN17P56750 224 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 INPP5JQ15735 1006 aaPredicted RBP12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 FBXL6Q8N531 539 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 RBPJLQ9UBG7 517 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 H7C1C5 153 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 HTRA3P83110 453 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 TRPM6Q9BX84 2022 aa12.48□□□□□ -0.41
SIPA1L3-201ENST00000222345 LRRC3CA6NJW4 275 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms