RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 BDKRB2P30411 391 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 HNRNPKP61978 463 aaKnown RBP eCLIP13.41□□□□□ -0.26
EFNB1-201ENST00000204961 SRSF3P84103 164 aaKnown RBP13.41□□□□□ -0.26
EFNB1-201ENST00000204961 MYBPHQ13203 477 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 INO80EQ8NBZ0 244 aaPredicted RBP13.41□□□□□ -0.26
EFNB1-201ENST00000204961 PXT1Q8NFP0 134 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 CCDC107Q8WV48 283 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 GNRHR2Q96P88 292 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 CDCA3Q99618 268 aaPredicted RBP13.41□□□□□ -0.26
EFNB1-201ENST00000204961 HDHD3Q9BSH5 251 aaPredicted RBP13.41□□□□□ -0.26
EFNB1-201ENST00000204961 PBOV1Q9GZY1 135 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF878C9JN71 531 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 EFNA2O43921 213 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 OR2A4O95047 310 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 ASCL1P50553 236 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 TMEM17Q86X19 198 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 CDH26Q8IXH8 852 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 OR4K15Q8NH41 348 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 PHYHIPQ92561 330 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 MRPS24Q96EL2 167 aaKnown RBP13.41□□□□□ -0.26
EFNB1-201ENST00000204961 OR2A7Q96R45 310 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 SLC6A15Q9H2J7 730 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 LDAHQ9H6V9 325 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 CSAG2Q9Y5P2 127 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 R4GMQ9 66 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 GABRA4P48169 554 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 TFAP2EQ6VUC0 442 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 C1QL2Q7Z5L3 287 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 TOMM40LQ969M1 308 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 C12orf57Q99622 126 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF581Q9P0T4 197 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 DISC1C4P0D8 188 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 H3BMH7 237 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 TSPAN2O60636 221 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 TTRP02766 147 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 GLRA1P23415 457 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 OPRM1P35372 400 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 OR3A2P47893 321 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 IGLV3-21P80748 117 aaPredicted RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 MRPS10P82664 201 aaKnown RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 H1FNTQ75WM6 255 aaPredicted RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 CBLN2Q8IUK8 224 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 SLC25A45Q8N413 288 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 ARHGAP5-AS1Q96IT6 56 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 TSNAXQ99598 290 aaKnown RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 R4GN57 208 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 ZFHX4Q86UP3 3567 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 LINC01387J3KSC0 135 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 B3GALNT1O75752 331 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 GLAP06280 429 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 CRABP1P29762 137 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 SLC6A8P48029 635 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF41P51814 821 aaPredicted RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 OR2W3Q7Z3T1 314 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 C5orf24Q7Z6I8 188 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 OR51F2Q8NH61 342 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 OR2AE1Q8NHA4 323 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 FAM131CQ96AQ9 280 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 G6PC2Q9NQR9 355 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 UPB1Q9UBR1 384 aa13.4□□□□□ -0.26
EFNB1-201ENST00000204961 PTPRZ1P23471 2315 aaPredicted RBP13.4□□□□□ -0.26
EFNB1-201ENST00000204961 RAB27BO00194 218 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF208O43345 1280 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 DUX1O43812 170 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 IL5P05113 134 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 CPN1P15169 458 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 LAP3P28838 519 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 FASLGP48023 281 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 CLDN17P56750 224 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF121P58317 390 aaPredicted RBP13.39□□□□□ -0.27
EFNB1-201ENST00000204961 FXYD4P59646 89 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 SP6Q3SY56 376 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 SHEQ5VZ18 495 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM71Q6P5X7 295 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 CLRN3Q8NCR9 226 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF519Q8TB69 540 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 PMM1Q92871 262 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 CRB3Q9BUF7 120 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 SERINC1Q9NRX5 453 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 H7C2Y5 167 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF432O94892 652 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 NXPH3O95157 252 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 POU2F2P09086 479 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 QDPRP09417 244 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 FAHP16930 419 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 Q7L0L9 218 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
EFNB1-201ENST00000204961 OR51T1Q8NGJ9 327 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 GPHA2Q96T91 129 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 C8orf33Q9H7E9 229 aaPredicted RBP13.39□□□□□ -0.27
EFNB1-201ENST00000204961 MRPS28Q9Y2Q9 187 aaKnown RBP13.39□□□□□ -0.27
EFNB1-201ENST00000204961 OR5H15A6NDH6 313 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms