RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ISLRO14498 428 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 KCNAB3O43448 404 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 DNPH1O43598 174 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ACTL6AO96019 429 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ATXN1LP0C7T5 689 aaKnown RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 CD200P41217 278 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 EVX1P49640 407 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 RHOBP62745 196 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 FA2HQ7L5A8 372 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 AAED1Q7RTV5 226 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 THNSL2Q86YJ6 484 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 DPF1Q92782 380 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 SRRQ9GZT4 340 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 TBX21Q9UL17 535 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 KLF13Q9Y2Y9 288 aaPredicted RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 AHDC1Q5TGY3 1603 aaPredicted RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 SLC22A20A6NK97 555 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 DBX1A6NMT0 343 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 A8MU76 341 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 GGT5P36269 586 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 RPS26P62854 115 aaKnown RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 RACK1P63244 317 aaKnown RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF345Q14585 488 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 RAB6CQ53S08 254 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 Q6ZSR6 202 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 FAM57BQ71RH2 274 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 LINC00346Q8IVM7 164 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 SIAH3Q8IW03 269 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 OR5AP2Q8NGF4 316 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 OLIG1Q8TAK6 271 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF480Q8WV37 535 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 LHX4Q969G2 390 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 FBXL2Q9UKC9 423 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ANKRD61A6NGH8 418 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 AQP7P3A6NL99 342 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 SMAD6O43541 496 aaKnown RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 GNG4P50150 75 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ERVFC1-1P60608 527 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 RELBQ01201 579 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 FFAR4Q5NUL3 377 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 SLC39A11Q8N1S5 342 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ZBTB34Q8NCN2 500 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 SARAFQ96BY9 339 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 PELI1Q96FA3 418 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 ABHD14BQ96IU4 210 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 WDFY2Q96P53 400 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 TXNIPQ9H3M7 391 aa5.55□□□□□ -1.52
VPS13D-201ENST00000011700 BARX1Q9HBU1 254 aaPredicted RBP5.55□□□□□ -1.52
VPS13D-201ENST00000011700 GSTZ1O43708 216 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 DUS4LO95620 317 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MT-ND6P03923 174 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CRYBA1P05813 215 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SRP9P49458 86 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 OR4S1Q8NGB4 309 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PDXPQ96GD0 296 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 APIPQ96GX9 242 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SPANXDQ9BXN6 97 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 LAT2Q9GZY6 243 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SLC52A3Q9NQ40 469 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PIAS3Q9Y6X2 628 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 HEPACAM2A8MVW5 462 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 KIAA1324LA8MWY0 1029 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 LIMK1P53667 647 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TMEM30BQ3MIR4 351 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SYT14P1Q58G82 188 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 LRRC10Q5BKY1 277 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PDZD11Q5EBL8 140 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PARS2Q7L3T8 475 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF680Q8NEM1 530 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 OR52I1Q8NGK6 324 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 OR1L6Q8NGR2 347 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CCDC163A0A0D9SF12 145 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 A8MV72 311 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 HCRTR1O43613 425 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 KLF7O75840 302 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CFDP00746 253 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CD22P20273 847 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 GDF1P27539 372 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TP53I3Q53FA7 332 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 METRNLQ641Q3 311 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MUC15Q8N387 334 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 LTBP4Q8N2S1 1624 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 KIF26AQ9ULI4 1882 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 FAM227AF5H4B4 570 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TSPAN12O95859 305 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CD99P14209 185 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 IVDP26440 423 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ARIH2OSQ8N7S6 290 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 FAM173AQ9BQD7 235 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 FGFBP2Q9BYJ0 223 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 R4GMQ9 66 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TRBV23OR9-2A0A075B6M9 112 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TRBV11-1A0A0K0K1C0 115 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 GPR31O00270 319 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ORM2P19652 201 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 UCNP55089 124 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 C1orf140Q5VVS0 124 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF551Q7Z340 670 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CNEP1R1Q8N9A8 125 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms