RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZDHHC22Q8N966 263 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 OR5T2Q8NGG2 359 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 OR51F2Q8NH61 342 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 OR51E1Q8TCB6 317 aa12.48□□□□□ -0.41
USH1C-201ENST00000005226 NPIPA5E9PKD4 350 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 H3BML4 177 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 SDCBPO00560 298 aaPredicted RBP12.47□□□□□ -0.41
USH1C-201ENST00000005226 ZNF354AO60765 605 aaPredicted RBP12.47□□□□□ -0.41
USH1C-201ENST00000005226 HTR3BO95264 441 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 DUS4LO95620 317 aaKnown RBP12.47□□□□□ -0.41
USH1C-201ENST00000005226 KCNJ3P48549 501 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 EMP2P54851 167 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 PLAC9Q5JTB6 97 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 COMMD2Q86X83 199 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 C11orf40Q8WZ69 217 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 WWTR1Q9GZV5 400 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 PDE7BQ9NP56 450 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 DZANK1Q9NVP4 752 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 NPIPA1Q9UND3 350 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 PHF3Q92576 2039 aaKnown RBP12.47□□□□□ -0.41
USH1C-201ENST00000005226 RAB19A4D1S5 217 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 RAD51DO75771 328 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 MST1LQ2TV78 715 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 CCDC157Q569K6 752 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 OR10S1Q8NGN2 331 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 ADAMTS18Q8TE60 1221 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 KLHDC7BQ96G42 594 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 TMEM41AQ96HV5 264 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 C12orf57Q99622 126 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 GSKIPQ9P0R6 139 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 NDRG3Q9UGV2 375 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 UNC13CQ8NB66 2214 aa12.47□□□□□ -0.41
USH1C-201ENST00000005226 A0A0A6YYH2 397 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 BLACEA4D250 179 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 A6NJ64 397 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 METTL12A8MUP2 240 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 NUDT21O43809 227 aaKnown RBP12.46□□□□□ -0.41
USH1C-201ENST00000005226 ISG15P05161 165 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 CD79AP11912 226 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 TPT1P13693 172 aaKnown RBP12.46□□□□□ -0.41
USH1C-201ENST00000005226 ID4P47928 161 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 PHF19Q5T6S3 580 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 GLIPR1L1Q6UWM5 242 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 Q6ZS52 159 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 ASB10Q8WXI3 467 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 CNTNAP3BQ96NU0 1288 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 TEX13DA0A0J9YY54 714 aaPredicted RBP12.46□□□□□ -0.41
USH1C-201ENST00000005226 FTCDNL1E5RQL4 147 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 FAM157CP0CG43 387 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 RAB6AP20340 208 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 CDAP32320 146 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 OR3A4PP47883 348 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 CLDN6P56747 220 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 DEFB133Q30KQ1 61 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 UQCC3Q6UW78 93 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 ETV3LQ6ZN32 361 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 GRINAQ7Z429 371 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 ZNF285Q96NJ3 590 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
USH1C-201ENST00000005226 DBX1A6NMT0 343 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 F8VVB4 439 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 F8VWA3 439 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 MYF5P13349 255 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 ZNF93P35789 620 aaPredicted RBP12.46□□□□□ -0.42
USH1C-201ENST00000005226 AKR1C3P42330 323 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 RBM39Q14498 530 aaKnown RBP12.46□□□□□ -0.42
USH1C-201ENST00000005226 ANKRD55Q3KP44 614 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.46□□□□□ -0.42
USH1C-201ENST00000005226 KIAA0895LQ68EN5 471 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 CLEC18BQ6UXF7 455 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 HOGA1Q86XE5 327 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 SLC22A24Q8N4F4 322 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 NKAIN3Q8N8D7 197 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 OR5D18Q8NGL1 313 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 ARL11Q969Q4 196 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 ST6GALNAC5Q9BVH7 336 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 LPAR5Q9H1C0 372 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.42
USH1C-201ENST00000005226 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 IGKV3D-11A0A0A0MRZ8 115 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 CRYBA1P05813 215 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 SPP1P10451 314 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 EN2P19622 333 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 GLRA1P23415 457 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 BIDP55957 195 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 MFAP5Q13361 173 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 SLC29A4Q7RTT9 530 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms