RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Angpt4Q9WVH6 509 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 RydenQ8CAK3 290 aaKnown RBP15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Plch1Q4KWH5 1682 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 1700080E11RikE9Q9G1 206 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rps23P62267 143 aaKnown RBP15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm525Q3V3I5 90 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Malsu1Q9CWV0 228 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Samt2Q497M0 247 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cd3eapQ76KJ5 399 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1065Q7TR70 313 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rnf38Q8BI21 518 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Slc25a41Q8BVN7 312 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Galnt6Q8C7U7 622 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Spns3Q9D232 514 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Exosc8Q9D753 276 aaKnown RBP15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr872E9PVW2 323 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mmp2P33434 662 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rnf149Q3U2C5 394 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cyb5d2Q5SSH8 263 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cdc34Q8CFI2 235 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Frs3Q91WJ0 492 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr914E9PW59 316 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Uck1P52623 277 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 4930480E11RikQ0VG34 394 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 HypmQ9CR04 117 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tmem126bQ9D1R1 230 aa15.29■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 SvaE9PX96 165 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r152E9Q9N3 307 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r104L7N293 307 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 TectbO08524 329 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr13P34984 310 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cln3Q61124 438 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 LcorQ6ZPI3 433 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fbxl22Q8C7B6 236 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Nsun5Q8K4F6 465 aaKnown RBP15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rab38Q8QZZ8 211 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Abhd14bQ8VCR7 210 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 PigcQ9CXR4 297 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 GlceQ9EPS3 618 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm20518E9Q548 580 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hrh3P58406 445 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fabp5Q05816 135 aaKnown RBP15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sgip1Q8VD37 806 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Dcbld2Q91ZV3 769 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Scn5aQ9JJV9 2019 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr248E9Q1L6 309 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cmpk2Q3U5Q7 447 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Uts2bQ765I1 113 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 MrgprdQ91ZB8 321 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mrpl37Q921S7 423 aaKnown RBP15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 PecrQ99MZ7 303 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gstk1Q9DCM2 226 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 TncQ80YX1 2110 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 IhhP97812 411 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Taar6Q5QD13 345 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 ChdhQ8BJ64 596 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr346Q8VGJ7 309 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Slc29a3Q99P65 475 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr911-ps1A0A140T8K0 311 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm21761J3QK00 171 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Taar8cQ5QD05 344 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1216Q7TR05 311 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Lrrc75aQ7TSF4 339 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1Q8VGI1 314 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1417Q8VGJ6 315 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rnf186Q9D241 226 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Klhdc8bQ9D2D9 354 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm45711E0CXA2 391 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 InhbcP55104 352 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 BaxQ07813 192 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Htr1aQ64264 421 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tm4sf5Q91XF2 196 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Aig1Q9D8B1 262 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Galnt16Q9JJ61 558 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr65A0A1B0GSF4 315 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 P01631 113 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mtnd6P03925 172 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sstr4P49660 385 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hsd17b8P50171 259 aaKnown RBP15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Coq3Q8BMS4 370 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1411Q8VFC4 323 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ube2l6Q9QZU9 153 aa15.28■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr465-ps1A0A0U1RPZ4 315 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1348F6VB59 318 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 PthlhP22858 175 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 NarflQ7TMW6 476 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Dimt1Q9D0D4 313 aaKnown RBP15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fer1l5P0DM40 2038 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Arid1bE9Q4N7 2244 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr896-ps1A0A1L1SRZ8 308 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rhox7aA2A4F1 281 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rims4P60191 269 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tob1Q61471 362 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 SrmsQ62270 496 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 IgflQ6B9Z0 140 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1371Q7TQT7 311 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tas1r1Q99PG6 842 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Zfp109A0A0U1RPC5 652 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1218L7MU54 311 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pim1P06803 397 aa15.27■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 81.5 ms