RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PRSS45Q7RTY3 260 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 BPIFB6Q8NFQ5 453 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 OR2AE1Q8NHA4 323 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 GTF3AQ92664 365 aaKnown RBP11.31□□□□□ -0.6
GTF3A-209ENST00000640289 NINJ1Q92982 152 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 PIGTQ969N2 578 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 MRPS18AQ9NVS2 196 aaKnown RBP11.31□□□□□ -0.6
GTF3A-209ENST00000640289 TAAR3PQ9P1P4 343 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF319Q9P2F9 582 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 A0A1W2PPW3 197 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 NDUFS7O75251 213 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF254O75437 659 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 RPP14O95059 124 aaKnown RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 FADS2O95864 444 aaKnown RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PNPP00491 289 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 IGHA1P01876 353 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 KRT8P05787 483 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 RIDAP52758 137 aaKnown RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PSMA6P60900 246 aaKnown RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 SNRPD2P62316 118 aaKnown RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 ACTC1P68032 377 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 ACTA1P68133 377 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 MFGE8Q08431 387 aaPredicted RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PSG7Q13046 419 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 GK2Q14410 553 aaPredicted RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 TP53I3Q53FA7 332 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 KLHL22Q53GT1 634 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 GLYATL3Q5SZD4 288 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 LHFPL3Q86UP9 236 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 C1orf174Q8IYL3 243 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 ACBD7Q8N6N7 88 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 YIPF7Q8N8F6 280 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 OR5L1Q8NGL2 311 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 SNX33Q8WV41 574 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 GGHQ92820 318 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PPP1R14AQ96A00 147 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PGAM5Q96HS1 289 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 CNBD2Q96M20 576 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 COG8Q96MW5 612 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF184Q99676 751 aaPredicted RBP11.3□□□□□ -0.6
GTF3A-209ENST00000640289 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 NIPAL2Q9H841 368 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 FAM206AQ9NX38 181 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 EDARQ9UNE0 448 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PCDHGB5Q9Y5G0 923 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 PCDHGB1Q9Y5G3 927 aa11.3□□□□□ -0.6
GTF3A-209ENST00000640289 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 METTL15A6NJ78 407 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 FAM20BO75063 409 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
GTF3A-209ENST00000640289 APOC1P02654 83 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 TUBG1P23258 451 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 EVX1P49640 407 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 OR12D2P58182 307 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 SELENOVP59797 346 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 MVKQ03426 396 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF92Q03936 586 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 MALLQ13021 153 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 NKPD1Q17RQ9 610 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 CDONQ4KMG0 1287 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 FBXW12Q6X9E4 464 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 OR5AS1Q8N127 324 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 OR8B12Q8NGG6 310 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 HAVCR1Q96D42 359 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 PERPQ96FX8 193 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 VRK1Q99986 396 aaPredicted RBP11.29□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF649Q9BS31 505 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 ALG8Q9BVK2 526 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 TPK1Q9H3S4 243 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
GTF3A-209ENST00000640289 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 TUBG2Q9NRH3 451 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
GTF3A-209ENST00000640289 ERVK13-1Q9NX77 482 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 PURGQ9UJV8 347 aaKnown RBP11.29□□□□□ -0.6
GTF3A-209ENST00000640289 GNG8Q9UK08 70 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 PMF1-BGLAPU3KQ54 211 aa11.29□□□□□ -0.6
GTF3A-209ENST00000640289 HEATR1Q9H583 2144 aaKnown RBP11.29□□□□□ -0.6
GTF3A-209ENST00000640289 H3BSA7 217 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 M0R233 179 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 SLC1A7O00341 560 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 TIMM8AO60220 97 aaPredicted RBP11.28□□□□□ -0.6
GTF3A-209ENST00000640289 NAT2P11245 290 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 RAC2P15153 192 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 KITLGP21583 273 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 DCTDP32321 178 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PSMB10P40306 273 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PTH2RP49190 550 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 PPOXP50336 477 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 GALEQ14376 348 aa11.28□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF829Q3KNS6 432 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms