RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ETV1P50549 477 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 OR12D2P58182 307 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 UNQ6126/PRO20091Q6UXV3 157 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 ZNF786Q8N393 782 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 YIPF7Q8N8F6 280 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 LIME1Q9H400 295 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 BRD7Q9NPI1 651 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 FAM206AQ9NX38 181 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 SCN3BQ9NY72 215 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 PTTG3PQ9NZH4 202 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 ZNF319Q9P2F9 582 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 CMAHPQ9Y471 501 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 LRRC42Q9Y546 428 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 N6AMT1Q9Y5N5 214 aa16.68■□□□□ 0.26
HLA-A-209ENST00000638375 PNPP00491 289 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 APOC1P02654 83 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 SOD3P08294 240 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 C21orf33P30042 268 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 MPV17P39210 176 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 SLC35A2P78381 396 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 MFGE8Q08431 387 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 MED21Q13503 144 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 TMEM255AQ5JRV8 349 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 LIPNQ5VXI9 398 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 FAM57BQ71RH2 274 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 LRP11Q86VZ4 500 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 C1orf174Q8IYL3 243 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 MUC15Q8N387 334 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 STX19Q8N4C7 294 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 KLF14Q8TD94 323 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 MRPL24Q96A35 216 aaKnown RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 RNF166Q96A37 237 aaPredicted RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 MRPL37Q9BZE1 423 aaKnown RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 DUSP21Q9H596 190 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 ACOXLQ9NUZ1 547 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 CLEC2DQ9UHP7 191 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 GNG8Q9UK08 70 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 EXOSC1Q9Y3B2 195 aaKnown RBP16.67■□□□□ 0.26
HLA-A-209ENST00000638375 R4GMQ9 66 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 CELSR2Q9HCU4 2923 aa16.67■□□□□ 0.26
HLA-A-209ENST00000638375 TMEM269A0A1B0GVZ9 245 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 TMEM129A0AVI4 362 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 PTGES3LE9PB15 166 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 RPP14O95059 124 aaKnown RBP16.66■□□□□ 0.26
HLA-A-209ENST00000638375 CLPTM1O96005 669 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 CDK1P06493 297 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 ZNF250P15622 560 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 SERPINF1P36955 418 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 ACTA2P62736 377 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 ACTG2P63267 376 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 MST1LQ2TV78 715 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 ZNF829Q3KNS6 432 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-209ENST00000638375 RBM48Q5RL73 367 aaKnown RBP16.66■□□□□ 0.26
HLA-A-209ENST00000638375 GLYATL3Q5SZD4 288 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 C20orf204Q6ZNR8 217 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 FAM220AQ7Z4H9 259 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 FBXL14Q8N1E6 418 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 SYS1Q8N2H4 156 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 C4orf36Q96KX1 117 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 COG8Q96MW5 612 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 SYT3Q9BQG1 590 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 ISG20L2Q9H9L3 353 aaKnown RBP16.66■□□□□ 0.26
HLA-A-209ENST00000638375 MYEF2Q9P2K5 600 aaKnown RBP16.66■□□□□ 0.26
HLA-A-209ENST00000638375 TPRKBQ9Y3C4 175 aa16.66■□□□□ 0.26
HLA-A-209ENST00000638375 J3QLW9 94 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 TBX1O43435 398 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 CD8AP01732 235 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 ZNF19P17023 458 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 MYL12AP19105 171 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 TUBG1P23258 451 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 PSMB10P40306 273 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 MMP16P51512 607 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 HLXQ14774 488 aaPredicted RBP16.65■□□□□ 0.26
HLA-A-209ENST00000638375 EFNB3Q15768 340 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 ZNF718Q3SXZ3 478 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 MBNL2Q5VZF2 373 aaKnown RBP16.65■□□□□ 0.26
HLA-A-209ENST00000638375 KCTD20Q7Z5Y7 419 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 DTX2Q86UW9 622 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 OR8B12Q8NGG6 310 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 OR5L1Q8NGL2 311 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 OR2AE1Q8NHA4 323 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 SYNPRQ8TBG9 265 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 IGFBPL1Q8WX77 278 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 RORBQ92753 470 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 PPP1R14AQ96A00 147 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 PELI1Q96FA3 418 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 PGAM5Q96HS1 289 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 SIGLEC11Q96RL6 698 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 TRAF4Q9BUZ4 470 aaPredicted RBP16.65■□□□□ 0.26
HLA-A-209ENST00000638375 PLK3Q9H4B4 646 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 G6PC2Q9NQR9 355 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 TUBG2Q9NRH3 451 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 FAIMQ9NVQ4 179 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 ERVK-18Q9QC07 812 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 UNC79Q9P2D8 2635 aa16.65■□□□□ 0.26
HLA-A-209ENST00000638375 IGLV3-9A0A075B6K5 115 aa16.64■□□□□ 0.25
HLA-A-209ENST00000638375 ACOD1A6NK06 481 aa16.64■□□□□ 0.25
HLA-A-209ENST00000638375 VSTM5A8MXK1 200 aa16.64■□□□□ 0.25
HLA-A-209ENST00000638375 LOC110117498-PIK3R3F6TDL0 507 aa16.64■□□□□ 0.25
HLA-A-209ENST00000638375 H3BSA7 217 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms