RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 C20orf204Q6ZNR8 217 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 PLEKHG7Q6ZR37 379 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 LHFPL3Q86UP9 236 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 ZNF540Q8NDQ6 660 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 MRPL48Q96GC5 212 aaKnown RBP13.76□□□□□ -0.21
CLN6-216ENST00000636876 TMEM80Q96HE8 168 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 COG8Q96MW5 612 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 ZNF649Q9BS31 505 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 POFUT1Q9H488 388 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 ERVK13-1Q9NX77 482 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 UBAP1Q9NZ09 502 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 H3BSA7 217 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 ANXA2P07355 339 aaKnown RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 OR4A8P0C604 315 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 LIMS3P0CW19 117 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 LIMS4P0CW20 117 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 TUBG1P23258 451 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 TTKP33981 857 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 ACTA2P62736 377 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 ACTG2P63267 376 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 ZNF829Q3KNS6 432 aaPredicted RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 ZNF718Q3SXZ3 478 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 TP53I3Q53FA7 332 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 RBM48Q5RL73 367 aaKnown RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 PRSS45Q7RTY3 260 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 FBXL14Q8N1E6 418 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 ZNF786Q8N393 782 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 STX19Q8N4C7 294 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 YIPF7Q8N8F6 280 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 OR5L1Q8NGL2 311 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 MRPL24Q96A35 216 aaKnown RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 MYCBPQ99417 103 aaPredicted RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 ALG8Q9BVK2 526 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 OR2J1Q9GZK6 312 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 SP140LQ9H930 580 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 BRD7Q9NPI1 651 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 TUBG2Q9NRH3 451 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 FAIMQ9NVQ4 179 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 PTTG3PQ9NZH4 202 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 GNG8Q9UK08 70 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 FZR1Q9UM11 496 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 EXOSC1Q9Y3B2 195 aaKnown RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 TPRKBQ9Y3C4 175 aa13.75□□□□□ -0.21
CLN6-216ENST00000636876 ANKRD17O75179 2603 aaKnown RBP13.75□□□□□ -0.21
CLN6-216ENST00000636876 DSCAMO60469 2012 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 TMEM269A0A1B0GVZ9 245 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 C5orf63A6NC05 138 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 ACOD1A6NK06 481 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 DANCRP0C864 163 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 ZNF250P15622 560 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 MYL12AP19105 171 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 ANOS1P23352 680 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 SERPINF1P36955 418 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 ETV1P50549 477 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 MVKQ03426 396 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 MED21Q13503 144 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 SNAI3Q3KNW1 292 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 LIPNQ5VXI9 398 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 FAM57BQ71RH2 274 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 FAM220AQ7Z4H9 259 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 KCTD20Q7Z5Y7 419 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 DTX2Q86UW9 622 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 MUC15Q8N387 334 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 SYNPRQ8TBG9 265 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 PGAM5Q96HS1 289 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 PAK1IP1Q9NWT1 392 aaPredicted RBP13.74□□□□□ -0.21
CLN6-216ENST00000636876 FAM206AQ9NX38 181 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 LRRC42Q9Y546 428 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 N6AMT1Q9Y5N5 214 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 R4GMQ9 66 aa13.74□□□□□ -0.21
CLN6-216ENST00000636876 PTGES3LE9PB15 166 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 J3QLW9 94 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 SRSF10O75494 262 aaKnown RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 CDK1P06493 297 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 SOD3P08294 240 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 TACSTD2P09758 323 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 ZNF19P17023 458 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 CRHBPP24387 322 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 MPV17P39210 176 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 MMP16P51512 607 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 OR12D2P58182 307 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 SLC35A2P78381 396 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 MFGE8Q08431 387 aaPredicted RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 MALLQ13021 153 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 EFNB3Q15768 340 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 AGAP6Q5VW22 663 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 MBNL2Q5VZF2 373 aaKnown RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 FBXW12Q6X9E4 464 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 LRP11Q86VZ4 500 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 EGFL6Q8IUX8 553 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 SYS1Q8N2H4 156 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 OR52H1Q8NGJ2 320 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 KLF14Q8TD94 323 aaPredicted RBP13.73□□□□□ -0.21
CLN6-216ENST00000636876 SGCDQ92629 289 aa13.73□□□□□ -0.21
CLN6-216ENST00000636876 NRGNQ92686 78 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms