RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 MSRB3Q8IXL7 192 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 FGFRL1Q8N441 504 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 OR9I1Q8NGQ6 314 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 PFN4Q8NHR9 129 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 SLC7A13Q8TCU3 470 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 LRRC8CQ8TDW0 803 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 LIPHQ8WWY8 451 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 DMRTB1Q96MA1 342 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 TMEM109Q9BVC6 243 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 NPFFR1Q9GZQ6 430 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 FAM234AQ9H0X4 552 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 RAB18Q9NP72 206 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 SDR39U1Q9NRG7 319 aaPredicted RBP14.78□□□□□ -0.04
CLN6-212ENST00000636020 KAAG1Q9UBP8 84 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 LGALS13Q9UHV8 139 aa14.78□□□□□ -0.04
CLN6-212ENST00000636020 HDAC3O15379 428 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 BIRC5O15392 142 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 ZNF26P17031 533 aaPredicted RBP14.77□□□□□ -0.05
CLN6-212ENST00000636020 RPL4P36578 427 aaKnown RBP14.77□□□□□ -0.05
CLN6-212ENST00000636020 KLHL22Q53GT1 634 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 FAM90A1Q86YD7 464 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 CMTM4Q8IZR5 234 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 OR1F12Q8NHA8 337 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 APOBEC3DQ96AK3 386 aaPredicted RBP14.77□□□□□ -0.05
CLN6-212ENST00000636020 SGTBQ96EQ0 304 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 CPPED1Q9BRF8 314 aaPredicted RBP14.77□□□□□ -0.05
CLN6-212ENST00000636020 ZNF702PQ9H963 129 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 WDR76Q9H967 626 aa14.77□□□□□ -0.05
CLN6-212ENST00000636020 IGF2P01344 180 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 UBE2E1P51965 193 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 SLC35A2P78381 396 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 ACSM1Q08AH1 577 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 HABP2Q14520 560 aaPredicted RBP14.76□□□□□ -0.05
CLN6-212ENST00000636020 CCDC92Q53HC0 331 aaPredicted RBP14.76□□□□□ -0.05
CLN6-212ENST00000636020 CASC10Q5T4H9 136 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 C17orf50Q8WW18 174 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 RORBQ92753 470 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 RCC1LQ96I51 464 aaKnown RBP14.76□□□□□ -0.05
CLN6-212ENST00000636020 SLAMF8Q9P0V8 285 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 GMEB1Q9Y692 573 aa14.76□□□□□ -0.05
CLN6-212ENST00000636020 CHST1O43916 411 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 PTBP3O95758 552 aaKnown RBP14.75□□□□□ -0.05
CLN6-212ENST00000636020 FAHP16930 419 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 PRSS12P56730 875 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 POU4F2Q12837 409 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 ALG10Q5BKT4 473 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 LRIF1Q5T3J3 769 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 Q8N2B8 174 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 AJUBAQ96IF1 538 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 HCAR1Q9BXC0 346 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 MEGF9Q9H1U4 602 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 IKZF5Q9H5V7 419 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 ATPIF1Q9UII2 106 aa14.75□□□□□ -0.05
CLN6-212ENST00000636020 A0A1B0GW55 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUS4LO95620 317 aaKnown RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L2P0CJ85 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L3P0CJ86 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L4P0CJ87 422 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L5P0CJ88 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L6P0CJ89 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L7P0CJ90 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 GPX2P18283 190 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 PPIBP23284 216 aaKnown RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 HOXD3P31249 432 aaPredicted RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 IFFO1Q0D2I5 559 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 AQP6Q13520 282 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DCTN2Q13561 401 aaKnown RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 LRRC75BQ2VPJ9 315 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4L9Q6RFH8 374 aaPredicted RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 RNF144BQ7Z419 303 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 NKAIN4Q8IVV8 208 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 PLPP7Q8NBV4 271 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 OR51G2Q8NGK0 314 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 ROPN1BQ9BZX4 212 aaPredicted RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 WNT10AQ9GZT5 417 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 ROPN1Q9HAT0 212 aaPredicted RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 GAR1Q9NY12 217 aaKnown RBP14.74□□□□□ -0.05
CLN6-212ENST00000636020 DUX4Q9UBX2 424 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 HIF3AQ9Y2N7 669 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 HYDINQ4G0P3 5121 aa14.74□□□□□ -0.05
CLN6-212ENST00000636020 A6NIZ1 184 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 M0QX08 132 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 CD247P20963 164 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 RBM34P42696 430 aaKnown RBP14.73□□□□□ -0.05
CLN6-212ENST00000636020 RAP1BP61224 184 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 RAP1AP62834 184 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 STX3Q13277 289 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 AANATQ16613 207 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 TEX36Q5VZQ5 186 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 OTPQ5XKR4 325 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 COLCA1Q6ZS62 124 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 GCSAMQ8N6F7 178 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 TMEM255BQ8WV15 326 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 ZBTB9Q96C00 473 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 MAELQ96JY0 434 aaKnown RBP14.73□□□□□ -0.05
CLN6-212ENST00000636020 DDOQ99489 341 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 NKX3-1Q99801 234 aaPredicted RBP14.73□□□□□ -0.05
CLN6-212ENST00000636020 TMBIM4Q9HC24 238 aa14.73□□□□□ -0.05
CLN6-212ENST00000636020 FAM53CQ9NYF3 392 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms