RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 ACHEP22303 614 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 SLC6A9P48067 706 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 CHN2P52757 468 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 CCL8P80075 99 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 PSG7Q13046 419 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 EIF2B1Q14232 305 aaKnown RBP13.24□□□□□ -0.29
LINC00339-209ENST00000635450 PCK2Q16822 640 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 SLC35D3Q5M8T2 416 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 KDM4DQ6B0I6 523 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 SHFQ7M4L6 423 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 CPOQ8IVL8 374 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 DIRC2Q96SL1 478 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 COPS4Q9BT78 406 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 POFUT1Q9H488 388 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 PURGQ9UJV8 347 aaKnown RBP13.24□□□□□ -0.29
LINC00339-209ENST00000635450 ZDHHC8Q9ULC8 765 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 OAZ3Q9UMX2 235 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 WNK2Q9Y3S1 2297 aa13.24□□□□□ -0.29
LINC00339-209ENST00000635450 SAC3D1A6NKF1 404 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 ZNF878C9JN71 531 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 M0R135 149 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 SPRY3O43610 288 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-209ENST00000635450 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 KITLGP21583 273 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 MMP15P51511 669 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 CDH15P55291 814 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 MALLQ13021 153 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 TSTQ16762 297 aaKnown RBP13.23□□□□□ -0.29
LINC00339-209ENST00000635450 FAM209AQ5JX71 171 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 DPY19L4Q7Z388 723 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 CLDND2Q8NHS1 167 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 HAVCR1Q96D42 359 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 SLAMF6Q96DU3 332 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 ZMYND19Q96E35 227 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-209ENST00000635450 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 RBM4BQ9BQ04 359 aaKnown RBP13.23□□□□□ -0.29
LINC00339-209ENST00000635450 OSBPL10Q9BXB5 764 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 C1QTNF5Q9BXJ0 243 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 EGLN1Q9GZT9 426 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 SAP30LQ9HAJ7 183 aa13.23□□□□□ -0.29
LINC00339-209ENST00000635450 ZNF275Q9NSD4 429 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-209ENST00000635450 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
LINC00339-209ENST00000635450 FAM157AC9JC47 383 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 IGHV1-46P01743 117 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 TNFSF4P23510 183 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 RBMXP38159 391 aaKnown RBP13.22□□□□□ -0.29
LINC00339-209ENST00000635450 SLC15A1P46059 708 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 MRPS11P82912 194 aaKnown RBP13.22□□□□□ -0.29
LINC00339-209ENST00000635450 HLXQ14774 488 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-209ENST00000635450 RSPO1Q2MKA7 263 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-209ENST00000635450 KRTAP27-1Q3LI81 207 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 FBXW12Q6X9E4 464 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 OR10S1Q8NGN2 331 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 KCNJ15Q99712 375 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 CIB1Q99828 191 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 PKP2Q99959 881 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 MARCH7Q9H992 704 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 H2AFY2Q9P0M6 372 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-209ENST00000635450 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 CACNG2Q9Y698 323 aa13.22□□□□□ -0.29
LINC00339-209ENST00000635450 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 CDC14BO60729 498 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 PSKH1P11801 424 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 SELEP16581 610 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 HSD11B1P28845 292 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 GPR6P46095 362 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-209ENST00000635450 PRKXP51817 358 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 GRB2P62993 217 aaKnown RBP13.21□□□□□ -0.29
LINC00339-209ENST00000635450 APOFQ13790 326 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 SLX4IPQ5VYV7 408 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 DRAM2Q6UX65 266 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 COLCA1Q6ZS62 124 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 SPATC1Q76KD6 591 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 TIGD4Q8IY51 512 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 OR5AS1Q8N127 324 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 ZNF283Q8N7M2 679 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 LINC01356Q8N9X3 169 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 ST7LQ8TDW4 575 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 HPS1Q92902 700 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 ELMOD3Q96FG2 381 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 C1orf159Q96HA4 380 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 ZNF582Q96NG8 517 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-209ENST00000635450 TOR3AQ9H497 397 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 TREM2Q9NZC2 230 aa13.21□□□□□ -0.29
LINC00339-209ENST00000635450 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-209ENST00000635450 DYSFO75923 2080 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 IGHV1-69-2A0A0G2JMI3 117 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 ZAR1LA6NP61 321 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 H3BNX3 289 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 SELENOFO60613 162 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 APOC1P02654 83 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 LYNP07948 512 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 ADH4P08319 380 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 SLC2A5P22732 501 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms