RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 SIGLEC7Q9Y286 467 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 IGLV1-36A0A0B4J1U3 117 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 LRRC30A6NM36 301 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 F5H5K5 113 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 G3V4G9 280 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 IFNL4K9M1U5 179 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 OR10H3O60404 316 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 PTP4A3O75365 173 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 CLPXO76031 633 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 PPP1R3DO95685 299 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF682O95780 498 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 GYPAP02724 150 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 IFNW1P05000 195 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 CA6P23280 308 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 RPS27P42677 84 aaKnown RBP10.63□□□□□ -0.71
LINC00339-206ENST00000634451 GATA4P43694 442 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 LSM6P62312 80 aaKnown RBP10.63□□□□□ -0.71
LINC00339-206ENST00000634451 ARF6P62330 175 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 KLF10Q13118 480 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 SEC23BQ15437 767 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 TAF9Q16594 264 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 ERICH5Q6P6B1 374 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 TMPRSS11FQ6ZWK6 438 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 PNKDQ8N490 385 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 FAM156AQ8NDB6 213 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 Q8TCH9 128 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 SLC7A13Q8TCU3 470 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 STON2Q8WXE9 905 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 SLCO4A1Q96BD0 722 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 SEH1LQ96EE3 360 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 HSH2DQ96JZ2 352 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 NMNAT1Q9HAN9 279 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-206ENST00000634451 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
LINC00339-206ENST00000634451 NRIP3Q9NQ35 241 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 INTS9Q9NV88 658 aaKnown RBP10.63□□□□□ -0.71
LINC00339-206ENST00000634451 PLXNB1O43157 2135 aa10.63□□□□□ -0.71
LINC00339-206ENST00000634451 TRBV4-1A0A0J9YWV2 114 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 A0A1W2PRD5 423 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 A0A1W2PRF3 423 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 A0A1W2PRM7 423 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 ELOVL7A1L3X0 281 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 P2RY10O00398 339 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 TIMM23O14925 209 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 ADAM20O43506 726 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 DIRAS1O95057 198 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 IFNA14P01570 189 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 VIMP08670 466 aaKnown RBP10.62□□□□□ -0.71
LINC00339-206ENST00000634451 SDHAP31040 664 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 CD200P41217 278 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 IER3P46695 156 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 RGS6P49758 472 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 KCNMB1Q16558 191 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 SLC18B1Q6NT16 456 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 CGB2Q6NT52 195 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 LYPD4Q6UWN0 246 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 C1orf87Q8N0U7 546 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 OR6V1Q8N148 313 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 TMEM86BQ8N661 226 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 OR2AE1Q8NHA4 323 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 SSMEM1Q8WWF3 244 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 GATAD2BQ8WXI9 593 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 RCN3Q96D15 328 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 RSRC1Q96IZ7 334 aaKnown RBP10.62□□□□□ -0.71
LINC00339-206ENST00000634451 FAM71F1Q96KD3 344 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-206ENST00000634451 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 COG8Q96MW5 612 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 COQ7Q99807 217 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 WACQ9BTA9 647 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 PPP1R3EQ9H7J1 279 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 TCF7L1Q9HCS4 588 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
LINC00339-206ENST00000634451 TET2Q6N021 2002 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-206ENST00000634451 LGALS8O00214 317 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 NDUFB2O95178 105 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 FSTL3O95633 263 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 TFF1P04155 84 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 LCATP04180 440 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 IRF2P14316 349 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 NCK1P16333 377 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 OMPP47874 163 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 COX10Q12887 443 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 KLRD1Q13241 179 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 OR8B8Q15620 311 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 FAM90A1Q86YD7 464 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 LNX2Q8N448 690 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 FAM86B1Q8N7N1 296 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 SLC26A10Q8NG04 563 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 OR5L1Q8NGL2 311 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 OR11L1Q8NGX0 322 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 DYRK2Q92630 601 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 GPX7Q96SL4 187 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-206ENST00000634451 NMNAT3Q96T66 252 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 SH3GL1Q99961 368 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 HDHD2Q9H0R4 259 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms