RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 UEVLDQ8IX04 471 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 CPNE9Q8IYJ1 553 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 ZNF676Q8N7Q3 588 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 ARIH2OSQ8N7S6 290 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 OR10A6Q8NH74 314 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 DNASE2BQ8WZ79 361 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 P2RY11Q96G91 374 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 ZNF599Q96NL3 588 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 ALKBH3Q96Q83 286 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-213ENST00000630925 OR5B12Q96R08 314 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 THAP7Q9BT49 309 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-213ENST00000630925 GGACTQ9BVM4 153 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 RAB34Q9BZG1 259 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 GLIPR2Q9H4G4 154 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 TPT1P8Q9HAU6 139 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 TESQ9UGI8 421 aaKnown RBP4.2□□□□□ -1.74
SDCBP-213ENST00000630925 SAMD4AQ9UPU9 718 aaKnown RBP4.2□□□□□ -1.74
SDCBP-213ENST00000630925 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-213ENST00000630925 HS3ST3B1Q9Y662 390 aa4.2□□□□□ -1.74
SDCBP-213ENST00000630925 COL5A3P25940 1745 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-213ENST00000630925 CENPVL1A0A0U1RR11 272 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CENPVL3A0A0U1RRI6 287 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 TSPAN11A1L157 253 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 PRORSD1PA6NEY8 169 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 GPR31O00270 319 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 HSPB6O14558 160 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 PHF1O43189 567 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CDC40O60508 579 aaKnown RBP eCLIP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 ZG16O60844 167 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 POP7O75817 140 aaKnown RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CRYAAP02489 173 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 HTR1EP28566 365 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CCKARP32238 428 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 RFC3P40938 356 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 AKR1C3P42330 323 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR3A2P47893 321 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 DNAJB13P59910 316 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 DGCR2P98153 550 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR2F1Q13607 317 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 GRK1Q15835 563 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CALCRLQ16602 461 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 SMIM21Q3B7S5 101 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CARD16Q5EG05 197 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 FAM71E1Q6IPT2 247 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 STEAP1BQ6NZ63 245 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 LRRC25Q8N386 305 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR5M9Q8NGP3 310 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR1K1Q8NGR3 316 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR1P1Q8NH06 330 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR4K15Q8NH41 348 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OR56B4Q8NH76 319 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 CRYGNQ8WXF5 182 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 DNAJC19Q96DA6 116 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 MED8Q96G25 268 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 TMEM80Q96HE8 168 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 ADTRPQ96IZ2 230 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 IL17FQ96PD4 163 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 APOL4Q9BPW4 351 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 OSBPL11Q9BXB4 747 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 NXF2Q9GZY0 626 aaKnown RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 NMNAT1Q9HAN9 279 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 FBXO6Q9NRD1 293 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 FBXL2Q9UKC9 423 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 SNX11Q9Y5W9 270 aa4.19□□□□□ -1.74
SDCBP-213ENST00000630925 SMG6Q86US8 1419 aaKnown RBP4.19□□□□□ -1.74
SDCBP-213ENST00000630925 A0A0G2JLL6 359 aaPredicted RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 A8MVM7 634 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 MSTNO14793 375 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 GPR137BO60478 399 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 OR7A10O76100 309 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 F2RP25116 425 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 GRPRP30550 384 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 S100A7P31151 101 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 XCR1P46094 333 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 GAS1P54826 345 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 GUSBP1Q15486 140 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 MPPED2Q15777 294 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 C9orf64Q5T6V5 341 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 N4BP2L1Q5TBK1 243 aaPredicted RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 TRMT10BQ6PF06 316 aaKnown RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 RAD9BQ6WBX8 426 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 GPR135Q8IZ08 494 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 EIF4E3Q8N5X7 224 aaKnown RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 KIR3DL3Q8N743 410 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 C16orf52Q8NHV5 167 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 TFB1MQ8WVM0 346 aaKnown RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 ASB17Q8WXJ9 295 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 ART4Q93070 314 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 ABTB1Q969K4 478 aaPredicted RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 HAUS1Q96CS2 278 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 C14orf144Q96I85 54 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 QTRT1Q9BXR0 403 aaKnown RBP4.18□□□□□ -1.74
SDCBP-213ENST00000630925 PANK3Q9H999 370 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 FKRPQ9H9S5 495 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 SLC25A19Q9HC21 320 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 MCUBQ9NWR8 336 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 SLAMF8Q9P0V8 285 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 PPP4R1LQ9P1A2 415 aa4.18□□□□□ -1.74
SDCBP-213ENST00000630925 MUTYHQ9UIF7 546 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms